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L3_105_000M1_scaffold_5439

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_5439_1
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1275)
DNA (1275bp) protein (425aa)
GTP-binding protein Der n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002EC813B
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
ribosome-associated GTPase EngA
L3_105_000M1_scaffold_5439_2
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1280..2629)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NK96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12553.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L3_105_000M1_scaffold_5439_3
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(3162..3362)
DNA (201bp) protein (67aa)
50S ribosomal protein L32 id=2752368 bin=GWF2_Clostridiales_36_10 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
50S ribosomal protein L32
Tax=GWF2_Clostridiales_36_10_curated
L3_105_000M1_scaffold_5439_4
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3375..3827)
DNA (453bp) protein (151aa)
Putative ACR COG1399 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RCM5_9FIRM
Putative ACR COG1399 {ECO:0000313|EMBL:CDC32277.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L3_105_000M1_scaffold_5439_5
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3941..5074)
DNA (1134bp) protein (378aa)
oxidoreductase n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI000300764E
oxidoreductase
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT03336.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L3_105_000M1_scaffold_5439_6
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5106..5966)
DNA (861bp) protein (287aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3E9W9_GEOS4
Xylose isomerase {ECO:0000313|EMBL:EXX86724.1}; TaxID=1380763 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
xylose isomerase domain-containing protein
L3_105_000M1_scaffold_5439_7
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6685..7572)
DNA (888bp) protein (296aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Galactokinase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QYT4_9CLOT
galactokinase
L3_105_000M1_scaffold_5439_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7905..8561)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R3Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39884.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_5439_9
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9012..10241)
DNA (1230bp) protein (410aa)
HD domain-containing protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YRU4_9FIRM
HD domain-containing protein {ECO:0000313|EMBL:CDA29490.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
metal-dependent phosphohydrolase HD sub domain-containing protein
L3_105_000M1_scaffold_5439_10
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10549..10857)
DNA (309bp) protein (103aa)
Ribonuclease S-4 n=1 Tax=Clostridium sp. CAG:964 RepID=R6U590_9CLOT
Ribonuclease S-4 {ECO:0000313|EMBL:CDC79700.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
hypothetical protein
L3_105_000M1_scaffold_5439_11
unknown

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comp(11113..11385)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5H473_9FIRM
L3_105_000M1_scaffold_5439_12
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11442..12140)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDC7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58368.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_105_000M1_scaffold_5439_13
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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12801..14774
DNA (1974bp) protein (658aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TWC0_9FIRM
Displaying 13 items

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