ggKbase home page

L3_105_000M1_scaffold_5560

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_5560_1
unknown

Not on your lists

2..1000
DNA (999bp) protein (333aa)

This feature has no annotations

L3_105_000M1_scaffold_5560_2
unknown

Not on your lists

990..1136
DNA (147bp) protein (49aa)

This feature has no annotations

L3_105_000M1_scaffold_5560_3
unknown

Not on your lists

1138..2178
DNA (1041bp) protein (347aa)

This feature has no annotations

L3_105_000M1_scaffold_5560_4
unknown

Not on your lists

2256..2588
DNA (333bp) protein (111aa)

This feature has no annotations

L3_105_000M1_scaffold_5560_5
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2613..3047
DNA (435bp) protein (145aa)
Putative holin protein n=1 Tax=Streptococcus pneumoniae RepID=A7DTD9_STREE
Phage holin protein {ECO:0000313|EMBL:CDO19405.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
toxin secretion/phage lysis holin
L3_105_000M1_scaffold_5560_6
unknown

Not on your lists

3044..3616
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MQN1_CLOTM
L3_105_000M1_scaffold_5560_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3916..4296)
DNA (381bp) protein (127aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPY5_9FIRM
L3_105_000M1_scaffold_5560_8
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4363..5559)
DNA (1197bp) protein (399aa)
lysC; Aspartokinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Aspartokinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P129_9FIRM
L3_105_000M1_scaffold_5560_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5594..6718)
DNA (1125bp) protein (375aa)
hom; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CCO05686.1}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CCO05686.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Homoserine dehydrogenase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBT5_9FIRM
L3_105_000M1_scaffold_5560_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6854..7399
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36116.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_105_000M1_scaffold_5560_11
unknown

Not on your lists

7396..7620
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 11 items

View Taxonomy