ggKbase home page

L3_105_000M1_scaffold_4082

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_4082_1
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..813
DNA (813bp) protein (271aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Caloramator australicus RC3 RepID=I7J590_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
hypothetical protein
L3_105_000M1_scaffold_4082_2
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

814..4344
DNA (3531bp) protein (1177aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
DNA polymerase III alpha subunit n=2 Tax=Caldanaerobacter subterraneus RepID=Q8R912_THETN
L3_105_000M1_scaffold_4082_3
unknown

Not on your lists

4345..4674
DNA (330bp) protein (110aa)

This feature has no annotations

L3_105_000M1_scaffold_4082_4
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5057..5512)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WK89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD04511.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_105_000M1_scaffold_4082_5
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5955..6917
DNA (963bp) protein (321aa)
dacB3; D-alanyl-D-alanine carboxypeptidase DacB3 (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EMN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03563.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_105_000M1_scaffold_4082_6
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6979..7191
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U351_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU27523.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_105_000M1_scaffold_4082_7
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7248..10019
DNA (2772bp) protein (924aa)
ABC transporter ATP-binding protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QUR6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC39575.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
ABC-type transport system, ATPase component
Displaying 7 items

View Taxonomy