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L3_105_000M1_scaffold_4422

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_4422_1

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comp(2..154)
DNA (153bp) protein (51aa)
Recombination protein RecR n=3 Tax=root RepID=K1TTK6_9ZZZZ
Recombination protein RecR {ECO:0000313|EMBL:EKC73128.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
recombination protein RecR
L3_105_000M1_scaffold_4422_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(163..498)
DNA (336bp) protein (112aa)
Nucleoid-associated protein HMPREF1032_01220 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY69_9FIRM
Nucleoid-associated protein HMPREF1032_01220 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_105_000M1_scaffold_4422_3
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(823..2787)
DNA (1965bp) protein (655aa)
DNA polymerase III subunit gamma and tau n=1 Tax=Clostridium sp. CAG:964 RepID=R6UBD8_9CLOT
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CDC81880.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
dnaX; DNA polymerase III subunits gamma and tau
L3_105_000M1_scaffold_4422_4
unknown

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3119..3784
DNA (666bp) protein (222aa)

This feature has no annotations

L3_105_000M1_scaffold_4422_5
unknown

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3798..4226
DNA (429bp) protein (143aa)

This feature has no annotations

L3_105_000M1_scaffold_4422_6
unknown

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4223..5647
DNA (1425bp) protein (475aa)

This feature has no annotations

L3_105_000M1_scaffold_4422_7
unknown

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comp(5619..5915)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_105_000M1_scaffold_4422_8
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7074..7931)
DNA (858bp) protein (286aa)
DegV family EDD domain-containing protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MZ14_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EOS76265.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
degV family protein
L3_105_000M1_scaffold_4422_9
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7966..9291)
DNA (1326bp) protein (442aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ETM3_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
L3_105_000M1_scaffold_4422_10
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9295..9474)
DNA (180bp) protein (60aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DV49_CLOS4
Displaying 10 items

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