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L3_105_000M1_scaffold_3724

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3724_1
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..576
DNA (576bp) protein (192aa)
TraX protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NNT1_9FIRM
TraX protein {ECO:0000313|EMBL:CDF15099.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
hypothetical protein
L3_105_000M1_scaffold_3724_2
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1166..1855)
DNA (690bp) protein (230aa)
Spore cortex-lytic enzyme n=1 Tax=Clostridium sp. CAG:780 RepID=R5PUP3_9CLOT
Spore cortex-lytic enzyme {ECO:0000313|EMBL:CCZ17824.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
spore cortex-lytic protein
L3_105_000M1_scaffold_3724_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2148..4532
DNA (2385bp) protein (795aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFI6_9CLOT
UvrD/REP helicase
L3_105_000M1_scaffold_3724_4
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4537..5904
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AH66_9CLOT
rmuC; DNA recombination protein RmuC homolog
DNA recombination protein RmuC homolog {ECO:0000313|EMBL:CDZ23716.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_105_000M1_scaffold_3724_5
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5894..7030
DNA (1137bp) protein (379aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=7 Tax=Clostridium thermocellum RepID=A3DEB7_CLOTH
Cysteine desulfurase {ECO:0000313|EMBL:GAE88077.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L3_105_000M1_scaffold_3724_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7039..8214
DNA (1176bp) protein (392aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6D4Q2_9CLOT
thiI; Probable thiamine biosynthesis protein thiI
L3_105_000M1_scaffold_3724_7
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8219..8689
DNA (471bp) protein (157aa)
Putative competence-damage inducible protein n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KW83_9THEO
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
competence/damage-inducible protein CinA
L3_105_000M1_scaffold_3724_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9733..9924
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61790.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_105_000M1_scaffold_3724_9
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9973..10557
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ACS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37186.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
CAAX amino protease
Displaying 9 items

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