ggKbase home page

L3_105_000M1_scaffold_3926

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3926_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..804
DNA (804bp) protein (268aa)
Rod shape-determining protein RodA n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KVU4_CLOBM
rodA; rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:ACA53623.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L3_105_000M1_scaffold_3926_2
Clostridium sp. CAG:1219, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2511..2708
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1219 RepID=R5TB03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ56176.1}; TaxID=1262772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1219.;"
L3_105_000M1_scaffold_3926_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2822..3553)
DNA (732bp) protein (244aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B2K9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15642.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
putative membrane spanning protein
L3_105_000M1_scaffold_3926_4
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3645..6764)
DNA (3120bp) protein (1040aa)
Predicted permease n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMI3_9FIRM
Predicted permease {ECO:0000313|EMBL:CDC12455.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Predicted permease.
L3_105_000M1_scaffold_3926_5
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6758..7534)
DNA (777bp) protein (259aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A5N0_9FIRM
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWM54413.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_105_000M1_scaffold_3926_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7594..9612)
DNA (2019bp) protein (673aa)
Ferrous iron transporter B n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RX45_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:EHL66222.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
feoB; ferrous iron transport protein B
L3_105_000M1_scaffold_3926_7
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9609..9857)
DNA (249bp) protein (83aa)
Ferrous iron transport protein B n=1 Tax=Clostridium sp. CAG:127 RepID=R5NVW9_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:CCZ07983.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
ferrous iron transporter FeoB
L3_105_000M1_scaffold_3926_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9864..10466)
DNA (603bp) protein (201aa)
phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase (EC:2.7.1.39 2.7.1.- 3.1.3.3)
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z469_9FIRM
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein {ECO:0000313|EMBL:CDD35681.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Displaying 8 items

View Taxonomy