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L3_105_000M1_scaffold_3944

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3944_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(623..1384)
DNA (762bp) protein (254aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D7T0_9FIRM
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:ERI92383.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
carbon-nitrogen family hydrolase
L3_105_000M1_scaffold_3944_2
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1592..3337)
DNA (1746bp) protein (582aa)
Radical SAM superfamily protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W464_CLOBI
radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:AHM56216.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_105_000M1_scaffold_3944_3
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3876..5870
DNA (1995bp) protein (665aa)
M6 family metalloprotease domain-containing protein n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2STG0_9ENTE
Ig domain-containing protein
M6 family metalloprotease domain-containing protein {ECO:0000313|EMBL:EOH96111.1}; TaxID=1158609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus moraviensis ATCC BAA-383.;"
L3_105_000M1_scaffold_3944_4
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5880..6326
DNA (447bp) protein (149aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Bacteria RepID=B7AQH1_9FIRM
L3_105_000M1_scaffold_3944_5
unknown

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6943..7107
DNA (165bp) protein (55aa)

This feature has no annotations

L3_105_000M1_scaffold_3944_6
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7215..8609
DNA (1395bp) protein (465aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Asparagine--tRNA ligase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LY33_CLOCD
L3_105_000M1_scaffold_3944_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8631..9923
DNA (1293bp) protein (431aa)
Putative transcriptional regulator, GntR family n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UBC8_RUMA7
putative aminotransferase MSMEG_6286/MSMEI_6121
Putative aminotransferase MSMEG_6286/MSMEI_6121 {ECO:0000313|EMBL:CDZ23420.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_105_000M1_scaffold_3944_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10841..11227)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S7R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22761.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
Displaying 8 items

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