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L3_105_000M1_scaffold_750_22

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: comp(28327..29280)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 318.0
  • Bit_score: 418
  • Evalue 6.60e-114
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 318.0
  • Bit_score: 414
  • Evalue 1.90e-113
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8L5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 318.0
  • Bit_score: 418
  • Evalue 4.70e-114

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 954
ATGATAGAAATAGAAAAGCCGACAATCGAAGAAGTTGAACTTGCCGCCGACGGTACTTATGGGAAATTTGTCGTCGAGCCTCTCGAAAGAGGTTACGGTATCACTCTCGGAAATTCTCTCAGAAGAATACTGCTTTCCTCCTTGCAGGGGGCCGCGGTCACCTCTCTTAAAATAGACGGGGTTCAGCATGAGTTTTCGACGATTCCCGGAGTGAAAGAAGACGTCACCGAGATAGTTCTTAATATGAAGGGACTTATCACCAGACTTCACGGAGGAAAGACTTCTAAGTTCGCTTATATAGAAGTGAACGATGAGGGTGAGATAACCGCCGCCGATATAAAAGCGGATTCGGATATCGAAATTTTGAATCCTGATATGCATATAGCCACGATTACGAAAAAGACGCGTTTTTATATGGAAATTACTATCGGCATGGGCAGAGGTTACGTTTCCGCCGATAAGAATAAACCCGCGTCTTCTCCGATCGGGCTTATAGCTGTGGATTCTTCCCATTCTCCCGTAACAAAAGTCAATTATACGATAGAGAATACCCGTGTAGGGCAGATAACCGATTATGATAAGCTTACTCTTGAAGTCTGGACTAACGGAAGCGTTTCCGCCAAGACCGCCGTGTCTCTTTCCGCGAAGATAATGAGCGAGCATCTCTCGTTGTTTGTTAATCTCGCGGAGGATTCGGATGTCGGAGACGAGGTCTGGAAAGGCGACACCAATGAAAATAAAGAGAAGATCCTCAATATGACGATAGAAGATCTTGATCTTTCAGTCCGCTCTTTTAACTGTTTGAAAAGAGCCGGGATCAATACCGTTTACGATCTTATCAATAAGTCCCCAGAGGATATGATGAGGGTGCGTAATCTCGGTAAGAAATCTCTTGAAGAGGTTGTCGTTAAACTTGAATCTTTCGGTTTGAACTTTATGGATGAAAAAGAATAG
PROTEIN sequence
Length: 318
MIEIEKPTIEEVELAADGTYGKFVVEPLERGYGITLGNSLRRILLSSLQGAAVTSLKIDGVQHEFSTIPGVKEDVTEIVLNMKGLITRLHGGKTSKFAYIEVNDEGEITAADIKADSDIEILNPDMHIATITKKTRFYMEITIGMGRGYVSADKNKPASSPIGLIAVDSSHSPVTKVNYTIENTRVGQITDYDKLTLEVWTNGSVSAKTAVSLSAKIMSEHLSLFVNLAEDSDVGDEVWKGDTNENKEKILNMTIEDLDLSVRSFNCLKRAGINTVYDLINKSPEDMMRVRNLGKKSLEEVVVKLESFGLNFMDEKE*