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L3_105_000M1_scaffold_1548_10

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: comp(10905..11762)

Top 3 Functional Annotations

Value Algorithm Source
rsmA; Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182) similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 278.0
  • Bit_score: 288
  • Evalue 1.90e-75
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 278.0
  • Bit_score: 288
  • Evalue 9.30e-75
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium sp. CAG:352 RepID=R6QLT2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 282.0
  • Bit_score: 285
  • Evalue 5.60e-74

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Taxonomy

[Clostridium] cellulosi → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAATCTCGCGAGTCTTAAAGAAATACGACCGATACTGGAAAAAAACGGTTTTAATTTTTCCAAAGGCCTCGGTCAGAATTTTCTTATAAACGAAAGTATTCCGAAAAAAATAGCGCAGCTTTGCCCTTCTTCGAAAAGTTCTCTCGCGATAGAAATAGGGACCGGGGTCGGCTGTTTGACAAAGGAACTCGCGTTTCGGAATAAGAAAGTTGTCGCCGTAGAGCTTGATAAACGGCTTTTGCCGGTTCTCTCGGAAACTCTTGCCGAGTTTGACAATATAAGGATAATAAACGACGATATTTTAAAAGTAGATTTGAAGGCGGTTATAGAGGAAGAGGGATTTAAGGACGTTTTTGTTTGCGGAAATCTTCCGTATTATATAACTACTCCGATAGTTATGAAAATTTTTGAGTCCCGTCTTCCCCTTAAAAGCGTCGTAATAATGGTTCAAAAGGAAGTGGCCGAACGGTTTTTGGCTCCTCCCGGGACAAAAAATTACGGGGCGATAACCGCGGCGATATCTTATTACGCGAAAGTCGCCGGTTCTTTTTCTGTGTCCGCCGGAAATTTTTTCCCAAAGCCGAACGTAGATTCCGCGGTTGTTCGCTTTGATTTGATTTCGCCCCCTGTTTCTGTCAAAGATGAAACGTTGTTTTTCAGAGTTTTGAGGGCGGCGTTTTTAATGAGAAGGAAAACTCTCGCGAACAATTTGCAAACCGCTTTTTCCCTTCCGAAAAACGATGTCGTCAGTATGCTTGTTTCTCTCGGATATTCTTCCTCGGTCAGAGGCGAGGAGTTGGGGATATCCGATTTCGCGAGGATATCCGACGTGATAGCTTCTTTTTTGAAACCATAG
PROTEIN sequence
Length: 286
MNLASLKEIRPILEKNGFNFSKGLGQNFLINESIPKKIAQLCPSSKSSLAIEIGTGVGCLTKELAFRNKKVVAVELDKRLLPVLSETLAEFDNIRIINDDILKVDLKAVIEEEGFKDVFVCGNLPYYITTPIVMKIFESRLPLKSVVIMVQKEVAERFLAPPGTKNYGAITAAISYYAKVAGSFSVSAGNFFPKPNVDSAVVRFDLISPPVSVKDETLFFRVLRAAFLMRRKTLANNLQTAFSLPKNDVVSMLVSLGYSSSVRGEELGISDFARISDVIASFLKP*