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L3_105_000M1_scaffold_7179_3

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: 2447..3685

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 412.0
  • Bit_score: 603
  • Evalue 1.90e-169
glyA; serine hydroxymethyltransferase GlyA (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 412.0
  • Bit_score: 597
  • Evalue 1.60e-168
Serine hydroxymethyltransferase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UXB9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 412.0
  • Bit_score: 603
  • Evalue 1.30e-169

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Taxonomy

Ruminococcus sp. CAG:254 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1239
ATGCGAAATATTGATATTGTAAAAAGTTTTGACCCTGAACTCGGAAAAGCTATGGAATTCGAACTCGCCAGGCAAAAACAAAATATAGAACTCATAGCTTCGGAAAACATCGTTTCTGAGAATGTTTTAGCCGCGATGGGAAGCATATTAACAAACAAATACGCAGAAGGATATCCCGGGAAACGATATTACGGAGGCTGCGAATATGTGGATATCGTCGAGGATTTGGCGAGAGACAGAGCAAAGGAATTGTTTGGGGCAAAATACGCGAACGTCCAACCTCACAGCGGAGCGCAAGCGAATCTCGCCGTTTATTTCGCGTTTCTGAATTACGGTGACACCGTACTAGGGATGAATCTCGCCCACGGAGGACATCTCACTCATGGTTCCCCCGTCAATATGTCCGGTAAAAACTATAATATTATACCGTATGGGGTAGATGAAAATACATGTACGATAGATTATGACGAAGTCGAACGACTCGCGAAAGAACATAAACCGAAAATGATAATCGCGGGTGCAAGCGCCTATCCGAGACTTATTGATTTTAAGCGTTTCGCTGATATCGCTCACAGCGTCGGGGCTCTCTTAATGGTCGACATGGCCCATATAGCCGGACTCGTCGCCGCGGGCGTTCATCCGTCCCCGATGCCGTACGCCGACATAGTAACCTCTACCACCCACAAGACATTAAGAGGTCCCAGAGGCGGTCTTATATTAACAAATAATGAGGAATACGCGAAAGCGATAGATAAAGCGATTTTCCCTGGCTGTCAGGGAGGTCCTCTTTTGCATATTATAGCGGCAAAAGCAGTTTGCCTTAAAGAAGCTATGAGCGACGACTTTAAGGAATATCAAAAACAGGTCGTTAAAAACGCCGACGCGTTGGCGAAATCGCTTGTAGAATATGGTTTCGACCTTGTTTCGGGAGGAACTGACAACCATTTAATGCTCGTGGATTTGAGAAATTTCAATATTACGGGAAAAGAAATGGAAAGTCGTCTCGACGACGTAAGAATAACGGCAAACAAAAACGCAATTCCGTTCGACCCCGAAAAACCTTTTGTGACAAGCGGAATTCGTCTCGGAAGCCCTGCCGTCACTACAAGAGGCTTTAAAGAAGACGACATGAGAATTGTCGCCGAATGTATTTATCTCACCGCCAAAGACGAGACAAACAAAGAAAAAGTAAGATCTATGGTCGACGCTCTTTGCAAAAAACACCCAATTTACGAATAA
PROTEIN sequence
Length: 413
MRNIDIVKSFDPELGKAMEFELARQKQNIELIASENIVSENVLAAMGSILTNKYAEGYPGKRYYGGCEYVDIVEDLARDRAKELFGAKYANVQPHSGAQANLAVYFAFLNYGDTVLGMNLAHGGHLTHGSPVNMSGKNYNIIPYGVDENTCTIDYDEVERLAKEHKPKMIIAGASAYPRLIDFKRFADIAHSVGALLMVDMAHIAGLVAAGVHPSPMPYADIVTSTTHKTLRGPRGGLILTNNEEYAKAIDKAIFPGCQGGPLLHIIAAKAVCLKEAMSDDFKEYQKQVVKNADALAKSLVEYGFDLVSGGTDNHLMLVDLRNFNITGKEMESRLDDVRITANKNAIPFDPEKPFVTSGIRLGSPAVTTRGFKEDDMRIVAECIYLTAKDETNKEKVRSMVDALCKKHPIYE*