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L3_105_000M1_scaffold_7179

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_7179_1
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1407
DNA (1407bp) protein (469aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
Stage IV sporulation protein A n=1 Tax=Clostridium sp. CAG:440 RepID=R7GEL6_9CLOT
stage IV sporulation protein A
L3_105_000M1_scaffold_7179_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(1741..2181)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N853_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94087.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
putative membrane protein
L3_105_000M1_scaffold_7179_3
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2447..3685
DNA (1239bp) protein (413aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
glyA; serine hydroxymethyltransferase GlyA (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UXB9_9FIRM
L3_105_000M1_scaffold_7179_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4411..5403)
DNA (993bp) protein (331aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RBX3_9CLOT
L3_105_000M1_scaffold_7179_5
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5430..6146)
DNA (717bp) protein (239aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
RIP metalloprotease RseP n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXT1_9FIRM
membrane-associated zinc metalloprotease
Displaying 5 items

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