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L3_105_000M1_scaffold_2233

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2233_1
unknown

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comp(137..295)
DNA (159bp) protein (53aa)
putative ATPase (AAA+ superfamily)
L3_105_000M1_scaffold_2233_2
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(453..1403)
DNA (951bp) protein (317aa)
Thiamine pyrophosphate TPP-binding domain-containing protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IWK7_9CLOT
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:CDE55012.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
thiamine pyrophosphate enzyme-like TPP-binding protein
L3_105_000M1_scaffold_2233_3
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1405..2595)
DNA (1191bp) protein (397aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITF8_9CLOT
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:CDE55014.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
L3_105_000M1_scaffold_2233_4
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2708..2998)
DNA (291bp) protein (97aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase delta subunit n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU13_9CLOT
Pyruvate ferredoxin/flavodoxin oxidoreductase delta subunit {ECO:0000313|EMBL:CDE55016.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
L3_105_000M1_scaffold_2233_5
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3058..3639)
DNA (582bp) protein (194aa)
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
Pyruvate/ketoisovalerate oxidoreductase gamma subunit n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUK6_9CLOT
Pyruvate/ketoisovalerate oxidoreductase gamma subunit {ECO:0000313|EMBL:CDE55018.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_6
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3976..4614
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55020.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_7
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4678..5178)
DNA (501bp) protein (167aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:269 RepID=R7IWL5_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDE55022.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_8
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5311..5790
DNA (480bp) protein (160aa)
XRE family transcriptional regulator n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITH1_9CLOT
XRE family transcriptional regulator {ECO:0000313|EMBL:CDE55024.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_9
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5855..6391)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55026.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_10
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6435..7370)
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUL4_9CLOT
mraW; S-adenosyl-methyltransferase MraW
L3_105_000M1_scaffold_2233_11
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7388..7813)
DNA (426bp) protein (142aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITY5_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
mraZ protein
L3_105_000M1_scaffold_2233_12
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8049..8942
DNA (894bp) protein (298aa)
iscS2; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Clostridium sp. CAG:356 RepID=R7A4F9_9CLOT
Cysteine desulfurase {ECO:0000313|EMBL:CDD37627.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
L3_105_000M1_scaffold_2233_13
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8905..9180
DNA (276bp) protein (92aa)
Cysteine desulfurase n=1 Tax=Clostridium sp. CAG:356 RepID=R7A4F9_9CLOT
Cysteine desulfurase {ECO:0000313|EMBL:CDD37627.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
cysteine desulfurase
L3_105_000M1_scaffold_2233_14
unknown

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comp(9144..9251)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_105_000M1_scaffold_2233_15
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9232..9702)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55034.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_16
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9715..10611)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU32_9CLOT
LysR family transcriptional regulator {ECO:0000313|EMBL:CDE55036.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
transcriptional regulator
L3_105_000M1_scaffold_2233_17
unknown

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10787..11095
DNA (309bp) protein (103aa)

This feature has no annotations

L3_105_000M1_scaffold_2233_18
unknown

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comp(11118..12422)
DNA (1305bp) protein (435aa)

This feature has no annotations

L3_105_000M1_scaffold_2233_19
unknown

Not on your lists

comp(12391..12924)
DNA (534bp) protein (178aa)

This feature has no annotations

L3_105_000M1_scaffold_2233_20
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13093..14769)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55038.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_21
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14801..15730)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55040.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_2233_22
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15900..16325)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IWN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55042.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_2233_23
Clostridium sp. CAG:492, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16420..16851)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:492 RepID=R5YT58_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA30583.1}; TaxID=1262813 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:492.;"
L3_105_000M1_scaffold_2233_24
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16844..17557)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IRU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54038.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Displaying 24 items

View Taxonomy