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L3_105_000M1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_17_1
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(243..2843)
DNA (2601bp) protein (867aa)
alcohol dehydrogenase (EC:1.2.1.10 1.1.1.1)
Alcohol dehydrogenase class IV n=1 Tax=Clostridium sp. CAG:269 RepID=R7IWD7_9CLOT
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_2
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3202..5814
DNA (2613bp) protein (871aa)
mgtA; magnesium-importing ATPase (EC:3.6.3.2)
Magnesium-importing ATPase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IZ31_9CLOT
Magnesium-importing ATPase {ECO:0000313|EMBL:CDE55867.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_3
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5836..7785)
DNA (1950bp) protein (650aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
rnr; ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Clostridium sp. CAG:269 RepID=R7IW12_9CLOT
L3_105_000M1_scaffold_17_4
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7851..8099)
DNA (249bp) protein (83aa)
Protein translocase SecG subunit n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITD9_9CLOT
Protein translocase SecG subunit {ECO:0000313|EMBL:CDE54810.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
secG; preprotein translocase subunit SecG
L3_105_000M1_scaffold_17_5
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8166..8849)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54809.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_6
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8910..9245)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54808.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_17_7
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9331..9816)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IW07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54807.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_8
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9859..11046)
DNA (1188bp) protein (396aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITJ1_9CLOT
exodeoxyribonuclease VII large subunit
L3_105_000M1_scaffold_17_9
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11064..11507)
DNA (444bp) protein (148aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITD5_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
nusB; N utilization substance protein B
L3_105_000M1_scaffold_17_10
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11531..11734)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54804.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_11
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11764..12321)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54803.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_12
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12436..12867)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IW01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54802.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_17_13
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12974..14413)
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITI6_9CLOT
L3_105_000M1_scaffold_17_14
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14430..15047)
DNA (618bp) protein (206aa)
Segregation and condensation protein B n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITD1_9CLOT
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
chromosome segregation and condensation protein ScpB
L3_105_000M1_scaffold_17_15
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15217..15375
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54799.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_16
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15427..16248)
DNA (822bp) protein (274aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
ppiB; peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU26_9CLOT
L3_105_000M1_scaffold_17_17
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16344..17414)
DNA (1071bp) protein (357aa)
DNA integrity scanning protein DisA n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVZ7_9CLOT
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00207481}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
helix-hairpin-helix motif family protein
L3_105_000M1_scaffold_17_18
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17465..18826)
DNA (1362bp) protein (454aa)
DNA repair protein radA n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITI2_9CLOT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
radA; DNA repair protein RadA
L3_105_000M1_scaffold_17_19
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19026..19271
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54795.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_20
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19320..19592)
DNA (273bp) protein (91aa)
Putative septation protein SpoVG n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISX2_9CLOT
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
stage V sporulation protein G
L3_105_000M1_scaffold_17_21
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19823..21205
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU21_9CLOT
UDP-N-acetylmuramate--L-alanine ligase
L3_105_000M1_scaffold_17_22
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21222..21839)
DNA (618bp) protein (206aa)
Sporulation protein YtfJ n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVZ3_9CLOT
Sporulation protein YtfJ {ECO:0000313|EMBL:CDE54792.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
sporulation protein YtfJ
L3_105_000M1_scaffold_17_23
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21848..22429)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54790.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_24
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22486..23253)
DNA (768bp) protein (256aa)
Segregation and condensation protein A n=1 Tax=Clostridium sp. CAG:269 RepID=R7IU19_9CLOT
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_17_25
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23297..23800)
DNA (504bp) protein (168aa)
Regulatory protein RecX n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVZ0_9CLOT
Regulatory protein RecX {ECO:0000313|EMBL:CDE54787.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
recombination regulator RecX
L3_105_000M1_scaffold_17_26
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23949..24449
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54786.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_27
unknown

Not on your lists

comp(24484..24681)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_105_000M1_scaffold_17_28
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24671..26440)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7ITH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE54781.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_29
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26542..28779)
DNA (2238bp) protein (746aa)
plfB; Formate acetyltransferase (Pyruvateformate-lyase) (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Clostridium sp. CAG:269 RepID=R7ISW1_9CLOT
Formate C-acetyltransferase {ECO:0000313|EMBL:CDE54779.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_17_30
unknown

Not on your lists

comp(28953..29243)
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying items 1-30 of 213 in total

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