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L3_105_000M1_scaffold_532

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_532_1
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

569..1372
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IY09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55507.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
transketolase
L3_105_000M1_scaffold_532_2
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1413..2348
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55505.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
transketolase
L3_105_000M1_scaffold_532_3
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2402..3217)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55503.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_532_4
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3346..4596
DNA (1251bp) protein (417aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVB6_9CLOT
L3_105_000M1_scaffold_532_5
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4642..6210)
DNA (1569bp) protein (523aa)
VanW family protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV92_9CLOT
VanW family protein {ECO:0000313|EMBL:CDE55500.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
VanW
L3_105_000M1_scaffold_532_6
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6358..7674
DNA (1317bp) protein (439aa)
KWG Leptospira repeat protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUY9_9CLOT
KWG Leptospira repeat protein {ECO:0000313|EMBL:CDE55499.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
WG containing repeat
L3_105_000M1_scaffold_532_7
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7776..8627
DNA (852bp) protein (284aa)
Patatin n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVU0_9CLOT
Patatin {ECO:0000313|EMBL:CDE55498.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Patatin
L3_105_000M1_scaffold_532_8
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8843..9415
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IY00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55497.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_532_9
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9473..9727
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55496.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
TSCPD domain protein
L3_105_000M1_scaffold_532_10
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9775..11640)
DNA (1866bp) protein (622aa)
Transpeptidase involved in septal peptidoglycan synthesis (Penicillin-binding protein 3) n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV87_9CLOT
Transpeptidase involved in septal peptidoglycan synthesis (Penicillin-binding protein 3) {ECO:0000313|EMBL:CDE55495.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
ftsI; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3)
L3_105_000M1_scaffold_532_11
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11726..13255
DNA (1530bp) protein (510aa)
Mg chelatase-related protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUY1_9CLOT
Mg chelatase-related protein {ECO:0000313|EMBL:CDE55494.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Mg chelatase-like protein
L3_105_000M1_scaffold_532_12
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13280..14170
DNA (891bp) protein (297aa)
DNA protecting protein DprA n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVT8_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:CDE55493.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
DNA protecting protein DprA
L3_105_000M1_scaffold_532_13
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14163..14555
DNA (393bp) protein (131aa)
UPF0102 protein BN577_00701 n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXZ6_9CLOT
UPF0102 protein BN577_00701 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_532_14
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14646..15929
DNA (1284bp) protein (428aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Trigger factor n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUX6_9CLOT
trigger factor
L3_105_000M1_scaffold_532_15
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16066..16671
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVT6_9CLOT
L3_105_000M1_scaffold_532_16
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16689..18005
DNA (1317bp) protein (439aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXZ2_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
L3_105_000M1_scaffold_532_17
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18327..19727
DNA (1401bp) protein (467aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVA2_9CLOT
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L3_105_000M1_scaffold_532_18
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19756..20628
DNA (873bp) protein (291aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Release factor glutamine methyltransferase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV82_9CLOT
hemK; protein methyltransferase
L3_105_000M1_scaffold_532_19
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20607..21455
DNA (849bp) protein (283aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUX0_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|SAAS:SAAS00015186}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_532_20
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21439..22575
DNA (1137bp) protein (379aa)
coproporphyrinogen III oxidase (EC:1.-.-.-)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVT2_9CLOT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDE55483.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L3_105_000M1_scaffold_532_21
unknown

Not on your lists

22656..22895
DNA (240bp) protein (80aa)

This feature has no annotations

L3_105_000M1_scaffold_532_22
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23052..23966
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55482.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_532_23
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24050..24964
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE55481.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L3_105_000M1_scaffold_532_24
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25135..25602
DNA (468bp) protein (156aa)
Iron-dependent transcriptional regulator n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV77_9CLOT
Iron-dependent transcriptional regulator {ECO:0000313|EMBL:CDE55480.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Mn-dependent transcriptional regulator
L3_105_000M1_scaffold_532_25
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25624..26364
DNA (741bp) protein (247aa)
FeS assembly ATPase SufC n=1 Tax=Clostridium sp. CAG:269 RepID=R7IUW3_9CLOT
FeS assembly ATPase SufC {ECO:0000313|EMBL:CDE55479.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
FeS assembly ATPase SufC
L3_105_000M1_scaffold_532_26
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26378..27778
DNA (1401bp) protein (467aa)
FeS assembly protein SufB n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVS7_9CLOT
FeS assembly protein SufB {ECO:0000313|EMBL:CDE55478.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
sufB; FeS cluster assembly protein SufB
L3_105_000M1_scaffold_532_27
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27778..28824
DNA (1047bp) protein (349aa)
FeS assembly protein SufD n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXY2_9CLOT
FeS assembly protein SufD {ECO:0000313|EMBL:CDE55477.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
FeS assembly protein SufD
L3_105_000M1_scaffold_532_28
unknown

Not on your lists

comp(28869..29051)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_105_000M1_scaffold_532_29
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29136..30356
DNA (1221bp) protein (407aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
csd2; putative cysteine desulfurase Csd (EC:2.8.1.7)
Cysteine desulfurase SufS subfamily n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV93_9CLOT
L3_105_000M1_scaffold_532_30
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30371..30838
DNA (468bp) protein (156aa)
SUF system FeS assembly protein NifU family n=1 Tax=Clostridium sp. CAG:269 RepID=R7IV73_9CLOT
SUF system FeS assembly protein NifU family {ECO:0000313|EMBL:CDE55475.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
nifU2; NifU-like protein NifU
Displaying items 1-30 of 61 in total

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