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L3_105_000M1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_218_1
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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536..3496
DNA (2961bp) protein (987aa)
Bacterial membrane protein YfhO n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0S9_9CLOT
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CDC12091.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Predicted membrane protein
L3_105_000M1_scaffold_218_2
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3561..4934)
DNA (1374bp) protein (458aa)
Citrate transporter n=1 Tax=Clostridium sp. CAG:413 RepID=R6PQL9_9CLOT
Citrate transporter {ECO:0000313|EMBL:CDC12092.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
tyrosine transporter
L3_105_000M1_scaffold_218_3
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5058..6536)
DNA (1479bp) protein (493aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L-arabinose isomerase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NIY5_9CLOT
L-arabinose isomerase
L3_105_000M1_scaffold_218_4
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6553..8142)
DNA (1590bp) protein (530aa)
L-ribulokinase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NUQ8_9CLOT
L-ribulokinase {ECO:0000313|EMBL:CDC12094.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Sugar (pentulose and hexulose) kinases
L3_105_000M1_scaffold_218_5
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8311..8928
DNA (618bp) protein (206aa)
Fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NLK3_9CLOT
Fibronectin type III domain protein {ECO:0000313|EMBL:CDC12095.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
flavobacterium repeat protein
L3_105_000M1_scaffold_218_6
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8990..10372
DNA (1383bp) protein (461aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0T4_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:CDC12096.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
amino acid carrier protein
L3_105_000M1_scaffold_218_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10311..11024
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PQM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12097.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
DNA alkylation repair enzyme
L3_105_000M1_scaffold_218_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11266..12159
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NIZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12098.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_218_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12171..12749
DNA (579bp) protein (193aa)
DnaJ domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NUR1_9CLOT
DnaJ domain protein {ECO:0000313|EMBL:CDC12099.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
DnaJ related protein
L3_105_000M1_scaffold_218_10
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12764..13297
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NLK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12100.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_218_11
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13361..14623
DNA (1263bp) protein (421aa)
alpha-N-acetylgalactosaminidase (EC:3.2.1.49)
Alpha-N-acetylgalactosaminidase n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0T9_9CLOT
Alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:CDC12101.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_105_000M1_scaffold_218_12
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14634..15575
DNA (942bp) protein (314aa)
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Clostridium sp. CAG:413 RepID=R6PQM8_9CLOT
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:CDC12102.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
N-acetylglucosamine kinase
L3_105_000M1_scaffold_218_13
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15612..16895
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NUR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12104.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
glycoside hydrolase family 4
L3_105_000M1_scaffold_218_14
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17152..18297
DNA (1146bp) protein (382aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0U3_9CLOT
L3_105_000M1_scaffold_218_15
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18314..19258
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PQN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12107.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
glycosyl transferase
L3_105_000M1_scaffold_218_16
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19394..20761
DNA (1368bp) protein (456aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NIZ7_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDC12108.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Extracellular solute-binding protein, family 1 precursor
L3_105_000M1_scaffold_218_17
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20774..21628
DNA (855bp) protein (285aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:413 RepID=R6NUR8_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDC12109.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
binding-protein-dependent transport system inner membrane protein
L3_105_000M1_scaffold_218_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21625..22467
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0U9_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDC12111.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
binding-protein-dependent transport system inner membrane protein
L3_105_000M1_scaffold_218_19
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22480..23595
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJ02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12113.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_218_20
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23592..25058
DNA (1467bp) protein (489aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NLL7_9CLOT
L3_105_000M1_scaffold_218_21
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25264..26601
DNA (1338bp) protein (446aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0V6_9CLOT
L3_105_000M1_scaffold_218_22
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26630..27046
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJ07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12118.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
conserved hypothetical protein
L3_105_000M1_scaffold_218_23
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27113..27607
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NUS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12119.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L3_105_000M1_scaffold_218_24
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27661..27843
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NLM2_9CLOT
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
50S ribosomal protein L32
L3_105_000M1_scaffold_218_25
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27941..28786)
DNA (846bp) protein (282aa)
Aldose 1-epimerase n=1 Tax=Clostridium sp. CAG:413 RepID=R6PQP8_9CLOT
Aldose 1-epimerase {ECO:0000313|EMBL:CDC12122.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
aldolase 1 epimerase LacX
L3_105_000M1_scaffold_218_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28797..30146)
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW26_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB41240.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
MATE efflux family protein
L3_105_000M1_scaffold_218_27
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30326..31219
DNA (894bp) protein (298aa)
Dihydrodipicolinate synthetase family n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0X1_9CLOT
Dihydrodipicolinate synthetase family {ECO:0000313|EMBL:CDC12136.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
dihydrodipicolinate synthetase
L3_105_000M1_scaffold_218_28
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31243..32685
DNA (1443bp) protein (481aa)
Protein serine/threonine phosphatase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJ24_9CLOT
Protein serine/threonine phosphatase {ECO:0000313|EMBL:CDC12138.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
protein serine/threonine phosphatases
L3_105_000M1_scaffold_218_29
unknown

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33430..33636
DNA (207bp) protein (69aa)

This feature has no annotations

L3_105_000M1_scaffold_218_30
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33617..35209)
DNA (1593bp) protein (531aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0X6_9CLOT
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDC12141.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Displaying items 1-30 of 76 in total

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