ggKbase home page

L3_105_000M1_scaffold_679_29

Organism: dasL3_105_000M1_maxbin2_maxbin_096_fasta_fa

near complete RP 43 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 31311..32195

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 575
  • Evalue 2.30e-161
tRNA pseudouridine synthase B n=1 Tax=Clostridium sp. CAG:413 RepID=R6NZY6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 575
  • Evalue 1.60e-161
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 292.0
  • Bit_score: 286
  • Evalue 5.60e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:413 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGACCGGTATCATTATAATAGATAAGCCCAGTGGCATGACCTCCTTCGGCGCGGTGGCAAGGGTACGGCGCATATGCTCCACCAAGAAATGCGGCCACACGGGCACCCTCGACCCGATGGCGACGGGCGTGCTGACCGTCATGCTCGGCGGGGCGACCCGCTTTTGCGAGCTGCTTGAGAGCCACGACAAGAGCTATATCGCTTCGTTCCGCCTCGGCACGGTGACCGATACGCTCGATATCACGGGCAAGGTGCTTGAGACCCGCGCGGTGGATTGCTCTGAACAGCAGGTCAGGGACGCCGCCGAGGGCTTCGTTGGCGAGATAAGCCAGCTCCCGCCGATGTACTCCGCAATATCGGTCAACGGTCAGCGGCTCTATGACCTTGCAAGGCAGGGCATCGAGGTCGAGCGCACGCCGAGGCAGGTCAACATATTCTCAATAGATTTCCTATCGGCGAACGCCGAAGCGGGGGAATACGAGATAGCCGTCGCCTGCTCCTCGGGCACATATATACGCACTCTTATAGCCGATATCGGCGAAAAGCTCGGCTGCGGAGCGGTGATGACCGCCCTGCGCCGCACGAGCGCCAACGGCTTTGATATAAAGGATGCTGTGACGATAGAGCAGCTTGAGGCCGCCGCAAACGAAGACAGGCTCGGCGAAATACTGCTCCCCGTTGACAAGGCTCTCGGCGGCTACGGCTCGGTCACCGTCACCGAGGCTCAGGCGAAGCGCTTTTTAAACGGCGGCGAGCTTTTCCTTGAAAGGCTCAAGATCAAGGGTGAGGGCATATTTAGGGTCTATTCGCCCAAGGGGGATTTCCTCGGCCTCGGCGAAACCGAGGATGAGTATTTGAAAGTTCGCCGTGTTTTTCACAACTGA
PROTEIN sequence
Length: 295
MTGIIIIDKPSGMTSFGAVARVRRICSTKKCGHTGTLDPMATGVLTVMLGGATRFCELLESHDKSYIASFRLGTVTDTLDITGKVLETRAVDCSEQQVRDAAEGFVGEISQLPPMYSAISVNGQRLYDLARQGIEVERTPRQVNIFSIDFLSANAEAGEYEIAVACSSGTYIRTLIADIGEKLGCGAVMTALRRTSANGFDIKDAVTIEQLEAAANEDRLGEILLPVDKALGGYGSVTVTEAQAKRFLNGGELFLERLKIKGEGIFRVYSPKGDFLGLGETEDEYLKVRRVFHN*