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L3_105_000M1_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_540_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(139..744)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46320.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_540_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

948..3014
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04290.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putative RND superfamily exporter
L3_105_000M1_scaffold_540_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3045..5252
DNA (2208bp) protein (736aa)
Membrane protein-like protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I525_9FIRM
Membrane protein-like protein {ECO:0000313|EMBL:CDE46343.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
membrane protein-like protein
L3_105_000M1_scaffold_540_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5321..5626)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I384_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46344.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_540_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5960..6667)
DNA (708bp) protein (236aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I758_9FIRM
L3_105_000M1_scaffold_540_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6792..7424)
DNA (633bp) protein (211aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I533_9FIRM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CDE46353.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_540_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7570..9525)
DNA (1956bp) protein (652aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2 2.7.7.8)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I393_9FIRM
L3_105_000M1_scaffold_540_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9688..10371)
DNA (684bp) protein (228aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I400_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CDE46355.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
L3_105_000M1_scaffold_540_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10368..11048)
DNA (681bp) protein (227aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4F6_9FIRM
L3_105_000M1_scaffold_540_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11174..11635)
DNA (462bp) protein (154aa)
HutP family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I537_9FIRM
HutP family protein {ECO:0000313|EMBL:CDE46358.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_540_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11673..12179)
DNA (507bp) protein (169aa)
Nucleoside recognition domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I398_9FIRM
Nucleoside recognition domain protein {ECO:0000313|EMBL:CDE46359.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
membrane protein
L3_105_000M1_scaffold_540_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13042..13290
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I403_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46360.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
looped-hinge helix DNA binding domain, AbrB family
L3_105_000M1_scaffold_540_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13502..14236
DNA (735bp) protein (245aa)
Acyl-ACP thioesterase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4G1_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:CDE46361.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
acyl-ACP thioesterase
L3_105_000M1_scaffold_540_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14420..15142)
DNA (723bp) protein (241aa)
Single-strand binding protein/Primosomal replication protein n n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I767_9FIRM
Single-strand binding protein/Primosomal replication protein n {ECO:0000313|EMBL:CDE46362.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
single-strand binding protein/Primosomal replication protein n
L3_105_000M1_scaffold_540_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15173..15958)
DNA (786bp) protein (262aa)
Polysaccharide deacetylase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I540_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDE46363.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
polysaccharide deacetylase
L3_105_000M1_scaffold_540_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16430..18076)
DNA (1647bp) protein (549aa)
60 kDa chaperonin n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3A3_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
chaperonin GroEL
L3_105_000M1_scaffold_540_17
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18116..18400)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I405_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
co-chaperonin GroES
L3_105_000M1_scaffold_540_18
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18619..19686
DNA (1068bp) protein (356aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4G5_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CDE46366.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_540_19
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19771..20844)
DNA (1074bp) protein (358aa)
Putative virion core protein (Lumpy skin disease virus) n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I772_9FIRM
Putative virion core protein (Lumpy skin disease virus) {ECO:0000313|EMBL:CDE46367.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
antifreeze protein
L3_105_000M1_scaffold_540_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20888..21688)
DNA (801bp) protein (267aa)
Two component transcriptional regulator AraC family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I543_9FIRM
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CDE46368.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_540_21
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21778..22581)
DNA (804bp) protein (268aa)
Dehydrogenase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VSG8_CLOSH
dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:AGC69316.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L3_105_000M1_scaffold_540_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22578..23261)
DNA (684bp) protein (228aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3B4_9FIRM
L3_105_000M1_scaffold_540_23
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23350..23880
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I423_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46390.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_540_24
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23856..24230
DNA (375bp) protein (125aa)
Sporulation protein YtfJ n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4I4_9FIRM
Sporulation protein YtfJ {ECO:0000313|EMBL:CDE46391.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sporulation protein YtfJ
L3_105_000M1_scaffold_540_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24243..25394
DNA (1152bp) protein (384aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I564_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDE46393.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_540_26
GWE2_Gammaproteobacteria_42_36_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25431..25991)
DNA (561bp) protein (187aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit id=1821764 bin=GWE2_Gammaproteobacteria_42_36 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta
Tax=GWE2_Gammaproteobacteria_42_36_curated
L3_105_000M1_scaffold_540_27
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26008..26847)
DNA (840bp) protein (280aa)
fumarase alpha subunit (EC:4.2.1.2)
Fumarate hydratase alpha subunit n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4K7_9FIRM
Fumarate hydratase alpha subunit {ECO:0000313|EMBL:CDE46416.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_540_28
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26844..27713)
DNA (870bp) protein (290aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7B8_9FIRM
hypothetical protein
L3_105_000M1_scaffold_540_29
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27713..28657)
DNA (945bp) protein (315aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I586_9FIRM
Ribosomal RNA small subunit methyltransferase H
L3_105_000M1_scaffold_540_30
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28673..29953)
DNA (1281bp) protein (427aa)
FolC bifunctional protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3E2_9FIRM
FolC bifunctional protein {ECO:0000313|EMBL:CDE46419.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Displaying items 1-30 of 52 in total

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