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L3_105_000M1_scaffold_254_3

Organism: dasL3_105_000M1_maxbin2_maxbin_110_fasta_fa

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(2354..6052)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 1226.0
  • Bit_score: 2392
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIZ9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 1226.0
  • Bit_score: 2392
  • Evalue 0.0
Mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 1148.0
  • Bit_score: 944
  • Evalue 2.10e-272

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Taxonomy

Faecalibacterium sp. CAG:74 → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3699
ATGAATCAGGCATTATTATCCGGCATTGCGTCGAAAGCGTATGACAAGCTGCTGAAAGCAACGGAAAGCAAACAGCCCATCGCCGTGACGGGGCTGCCGGACACAATGGCGGCGTATATCGCGTCAAAACTCTGCGCCGATACGGGCAAAAAGGTGCTGCTGATTTCCGGCAACGACCTCAAGGCGGCGCACGACGCCGAGGACGGCCAGCAGCTGCTGGAAACGGGTGTGGCGTGTCTGCCGGGCGGCGAAATTGACCTTACGCGCGGCGCGTCGAGCCACGAAAGCGCGTGGCGGCGGCTGGAAGCGCTGGCAAGGGCGCAGGAGGGGGACATCCGCCTGCTCTGCACGAGTATGGACGCCGCCTTGCAGCGCATGGGCAGCGCCGACCGCTTCCGCGAAGAGACGATTCGCCTTGCTCCCGGCGACCGAATCGACCTAAATGACCTCATCCGCCGCCTGACCGCCATGGGCTACGAGCGCGTCAGCATGGTGGAGGGCAAGGGGCAGTGTGCCCTGCGCGGCGGCATTATCGACGTGTATCCGCCCGCGTGCAGCCAGAGTTTGCGCATTGAGTTCTTCGACGACGAGGTGGACTCCATCCGCGAATTCGACTGCATCAGCCAGCGCAGCATGGATTCGGTGGAGAAATGCACGCTCACGCCCGCGACGGAGGTATTGCTTCCAACGGTGGATGCGGAAAAGGCAGCGCGGCGGATGCGGGACGCCATCGAGCGGCAGGGGGGCGACTTGACGCCCGCAAGTTCGACGCTCTTTTCGGATTTGCCGCCGCTGCCGGAGGATGACGCGGACGCGCCGGACTTCTTCGACAAGAACATCACCCCGAAGATTCGCGAAAAGCAGCAGACTGCCGCGCGCAAGGCGGAACTCGAACGCCGCCGCGCCCAACTGATGGCGGACGCGGACATGCTGGCGGAGGGGCTGCCGTTCAAGCGCATTCGGGCGTGGCTGACCGTGCTGACGGACGATACTTACACGGTGCTGGACTGGTTTGAGCCGGACATTGTGGTGCTGAGCGACCCGAATCTGCTCAGGAAGCGCGCGGAGGAACGCCGGGCGGGCTTTGCGGAGGATCTCGAAGGCGCGATGAGCCGCGACGAAGCCGTCAAGCAGCAGGAAACCCTGCTGATGGACTGGGACGAGCTGCTGCGGCATGTGCAGGGGTATGCGACGGTCGCGGTGACGGAGTTTCTGGAGGGCATGGCAGGCGTGGCGGTCAAGGATGCCGCTGATCTTGGCGTGCAGCGCGTGGCAGGGTATTCGTCGCAGATTCGCCCGCTGGCGGAGGACTGTGACGGCTGGCTGCGCGAGGGCTACCGCGTGGCGGTGCTGTGCGGCGGCGTGGCGCGCGGTCAGCGTCTGGCGGCGGCGCTGGAAGAACACGATGTCGCCGCGTCGTTCGCGGAGAAAATCGACAAACTGCCGGAAGAATGTGTGCAGGTGCTGCCCGGCACGCTGACGCACGGCTTCATCTGGGAAGAAACGCGCCTGATTGTTGTCAGCGACACGGACGTGTACGGCACGGGCTACCGCAAGGCGAAGAAGCGGCAGGCGGCGGGTGAAAAGATTGCCGCGTTCACCGACCTGAAGCCCGGCGACTTTGTGGTGCATGAGGAACATGGCGTTGGCATTTATCTTGGCACAGCGCAGATGAAAAACGGCGGCACGCGCCGGGACTATCTGCAAATCCAGTATCAGGGGAGTGACAAGCTCTATGTGCCGATTGAGGCGCTCAGCCGTGTGCAGCGCTACATCGGCAATCCGGCGAATCCCCCGAAGCTGAACAAGCTCGGCGGCGGCGACTGGCAGAAGCAGAAGGCGAAGGTCAAAGAAGGCCTGAAAAAGATGGCGTTTGACCTTGTGAAACTCTACGCGCGGCGGTCACAGGAGACGGGCTTTGCGTTCAGCGCGGATACGCCGTGGCAGCGCGAATTTGAGGATATGTTCCCCTATGAGCTGACCCCTGACCAAGAACAAAGCGTGAAGGAAATTACGGCGGACATGGAGTCGCCGCGCAACATGGACAGGCTGCTGTGCGGCGACGTGGGCTACGGCAAGACGGAGGTCAGCCTGCGCGCGGCGTTCAAGGCGCTGATGGACTCCAAGCAGGTTGCGATTCTTGCGCCGACGACGATTCTGGCACAGCAGCACTACAACACGGTCTTGAAGCGCTTCAAGGGCTTCCCTGTCAAGGTGGACGTGCTGAGCCGCTTCCGCACGGCGAAGGAAACCAAGGACGTTCTGCGCCGCGTGAAGGAGGGCGAAATCGACATCCTTGTCGGTACGCACCGCATTCTGGGCAAAGACGTGCAGTTCAAGAACCTCGGTCTGCTGATTGTGGACGAGGAGCAGCGATTTGGCGTGCAGCATAAGGAAATCATCAAGAACATGAAGCATCAGGTGGATGTGCTGACACTCTCCGCCACGCCGATTCCGCGCACGCTGCACATGTCGATGGTCGGCATCCGCGATATGTCCGTGCTGGAAACGCCGCCGGAGGAACGCCTGCCGGTGCAGACGCGAGTGATCGACTACAACGACGGCGTGATTCGCGACGCGATTCTGCGCGAGGTGTCGCGCGGGGGACAGGTGTACTTCCTCTATAACTCTGTGCAGACCATCGGTGCGTTCTATGAACGATTGAAGCAGCTTGTGCCGGAAGCGCGCATCGGCGTGGCGCACGGGCAGATGCGCGAACACGGCTTGGAGGACGTGATGATGGACTTCTACGGCGGCAGCTACGACGTGCTGCTCTGCACGACCATCATCGAAAGCGGCTTGGACGTGCCGACGGCGAATACGCTGATTGTCTTTGACGCTGACCGCTTCGGGCTGAGCCAGCTCTATCAGCTGCGCGGGCGCGTCGGGCGGAGCAACCGGCAGGCGTACGCGTACTTCACCATCCGCCCGGAACGCAGCTTGTCTGAGACGGCGGAGAAGCGCCTCGAAGCCATCAGGGAGTTCACGGAGTTCGGCGCTGGCTTCCGTATCGCCATGCGCGACCTTGAAATCCGCGGTGCGGGCAATATTCTGGGGCCGGAACAGCACGGGCATCTGGCGACCGTCGGCTACGACATGTACTGCAAACTGATGGAGGAGACGCTTCAGGAGGCGCGCGCGGAGCAGGAAGGTCTGCCGCCTGCGAAGCCGCACCTTGAAACGCGCGTGGACATCAAGGTGGACGCGTATCTGCCGGACGACTATGTACACGACGACCGGCAGCGGATGGAGATGTACAAGCGGATTGCAAGCCTGACGACGCAGGCCGACCGCGAGGACATCACCGACGAGCTGCTTGACCGCTTCGGCGAAGTGCCGCCGGTGGTGGAGACGCTGCTGGACGTTGCGCAGGTGCGCGTGCTGGCAAATCAGCTTGGTGTGTCGCTGGTGACCTACAAGCGCGGCGGCTTCCTCGTGATGAAGCTGAACGCAGAGTATATGCCCGACCAAGCGGCGTTCATTCCCGCGATGGCGATGACCGACAAACGCTTGATGCCCTCGACCACCGCACCGGATGTGCTGCTGCTGGTTGACCCGACGCTTGGCGAATACGCGATGCTGTCCGAAGCGGTGAAGGTGCTGGGGAAGCTCAACGAGAATATCGAGACGATGCTGAAAAAGCAGAAAAAAGAAGCCAAACAGACCGCACAGAACAGCGGCAACCCAAAAGGAAAGTGA
PROTEIN sequence
Length: 1233
MNQALLSGIASKAYDKLLKATESKQPIAVTGLPDTMAAYIASKLCADTGKKVLLISGNDLKAAHDAEDGQQLLETGVACLPGGEIDLTRGASSHESAWRRLEALARAQEGDIRLLCTSMDAALQRMGSADRFREETIRLAPGDRIDLNDLIRRLTAMGYERVSMVEGKGQCALRGGIIDVYPPACSQSLRIEFFDDEVDSIREFDCISQRSMDSVEKCTLTPATEVLLPTVDAEKAARRMRDAIERQGGDLTPASSTLFSDLPPLPEDDADAPDFFDKNITPKIREKQQTAARKAELERRRAQLMADADMLAEGLPFKRIRAWLTVLTDDTYTVLDWFEPDIVVLSDPNLLRKRAEERRAGFAEDLEGAMSRDEAVKQQETLLMDWDELLRHVQGYATVAVTEFLEGMAGVAVKDAADLGVQRVAGYSSQIRPLAEDCDGWLREGYRVAVLCGGVARGQRLAAALEEHDVAASFAEKIDKLPEECVQVLPGTLTHGFIWEETRLIVVSDTDVYGTGYRKAKKRQAAGEKIAAFTDLKPGDFVVHEEHGVGIYLGTAQMKNGGTRRDYLQIQYQGSDKLYVPIEALSRVQRYIGNPANPPKLNKLGGGDWQKQKAKVKEGLKKMAFDLVKLYARRSQETGFAFSADTPWQREFEDMFPYELTPDQEQSVKEITADMESPRNMDRLLCGDVGYGKTEVSLRAAFKALMDSKQVAILAPTTILAQQHYNTVLKRFKGFPVKVDVLSRFRTAKETKDVLRRVKEGEIDILVGTHRILGKDVQFKNLGLLIVDEEQRFGVQHKEIIKNMKHQVDVLTLSATPIPRTLHMSMVGIRDMSVLETPPEERLPVQTRVIDYNDGVIRDAILREVSRGGQVYFLYNSVQTIGAFYERLKQLVPEARIGVAHGQMREHGLEDVMMDFYGGSYDVLLCTTIIESGLDVPTANTLIVFDADRFGLSQLYQLRGRVGRSNRQAYAYFTIRPERSLSETAEKRLEAIREFTEFGAGFRIAMRDLEIRGAGNILGPEQHGHLATVGYDMYCKLMEETLQEARAEQEGLPPAKPHLETRVDIKVDAYLPDDYVHDDRQRMEMYKRIASLTTQADREDITDELLDRFGEVPPVVETLLDVAQVRVLANQLGVSLVTYKRGGFLVMKLNAEYMPDQAAFIPAMAMTDKRLMPSTTAPDVLLLVDPTLGEYAMLSEAVKVLGKLNENIETMLKKQKKEAKQTAQNSGNPKGK*