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L3_105_000M1_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_254_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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462..926
DNA (465bp) protein (155aa)
Acetyltransferase GNAT family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9E4_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE47137.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_254_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1019..2347)
DNA (1329bp) protein (443aa)
Recombination protein MgsA n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I6M2_9FIRM
Recombination protein MgsA {ECO:0000313|EMBL:CDE47136.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
recombination factor protein RarA
L3_105_000M1_scaffold_254_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2354..6052)
DNA (3699bp) protein (1233aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Transcription-repair-coupling factor n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIZ9_9FIRM
Mfd; transcription-repair coupling factor
L3_105_000M1_scaffold_254_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6098..6748)
DNA (651bp) protein (217aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJG0_9FIRM
L3_105_000M1_scaffold_254_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6905..7741)
DNA (837bp) protein (279aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILW0_9FIRM
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:CDE51622.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_254_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7755..8894)
DNA (1140bp) protein (380aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJY0_9FIRM
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:CDE51623.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_254_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8891..11161)
DNA (2271bp) protein (757aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIL2_9FIRM
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:CDE51624.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DEAD/DEAH box helicase
L3_105_000M1_scaffold_254_8
unknown

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11199..11756
DNA (558bp) protein (186aa)

This feature has no annotations

L3_105_000M1_scaffold_254_9
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11801..12013)
DNA (213bp) protein (71aa)
50S ribosomal protein L28 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I3J8_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rpmB; putative 50S ribosomal protein L28
L3_105_000M1_scaffold_254_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12464..13096)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IK30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51668.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_254_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13182..13676)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IM15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51667.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_254_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13944..14291
DNA (348bp) protein (116aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ57_9FIRM
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDE51665.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Predicted transcriptional regulators
L3_105_000M1_scaffold_254_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14362..15138)
DNA (777bp) protein (259aa)
Sporulation transcriptional activator Spo0A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IK23_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
spo0A; stage 0 sporulation protein A
L3_105_000M1_scaffold_254_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15655..17613)
DNA (1959bp) protein (653aa)
Tetratricopeptide repeat n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJK3_9FIRM
Tetratricopeptide repeat {ECO:0000313|EMBL:CDE51661.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_254_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17632..18297)
DNA (666bp) protein (222aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ50_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDE51660.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_254_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18307..19164)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IM04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51657.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_254_17
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19177..20082)
DNA (906bp) protein (302aa)
33 kDa chaperonin n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ45_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hslO; 33 kDa chaperonin
L3_105_000M1_scaffold_254_18
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20286..21032)
DNA (747bp) protein (249aa)
Methyltransferase domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIP9_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDE51654.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
methyltransferase
L3_105_000M1_scaffold_254_19
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21049..21207)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IK13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51653.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
small acid-soluble spore protein alpha/beta type
L3_105_000M1_scaffold_254_20
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21381..22379)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51652.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_254_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22599..24404)
DNA (1806bp) protein (602aa)
Conserved repeat domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJJ1_9FIRM
Conserved repeat domain protein {ECO:0000313|EMBL:CDE51651.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_254_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24807..26525
DNA (1719bp) protein (573aa)
phosphomannomutase (EC:5.4.2.2)
Phosphomannomutase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ37_9FIRM
Phosphomannomutase {ECO:0000313|EMBL:CDE51650.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_254_23
unknown

Not on your lists

comp(26628..27701)
DNA (1074bp) protein (358aa)

This feature has no annotations

L3_105_000M1_scaffold_254_24
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27723..27899)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HR41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO18593.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters
L3_105_000M1_scaffold_254_25
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27928..29175)
DNA (1248bp) protein (416aa)
Alpha-galactosidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IK07_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDE51648.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Alpha-galactosidase
L3_105_000M1_scaffold_254_26
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29221..30138)
DNA (918bp) protein (306aa)
Transcriptional regulator AraC family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILY9_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE51647.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
AraC family transcriptional regulator
L3_105_000M1_scaffold_254_27
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30364..33264
DNA (2901bp) protein (967aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJI3_9FIRM
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CDE51646.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sugar ABC transporter substrate-binding protein
L3_105_000M1_scaffold_254_28
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33287..34225
DNA (939bp) protein (313aa)
Putative ABC-type sugar transport system permease component n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ30_9FIRM
Putative ABC-type sugar transport system permease component {ECO:0000313|EMBL:CDE51645.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sugar ABC transporter permease
L3_105_000M1_scaffold_254_29
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34222..35172
DNA (951bp) protein (317aa)
Putative ABC-type sugar transport system permease component n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIN6_9FIRM
Putative ABC-type sugar transport system permease component {ECO:0000313|EMBL:CDE51644.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
sugar ABC transporter permease
L3_105_000M1_scaffold_254_30
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35188..36696
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IK02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51643.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
NHL repeat-containing protein
Displaying items 1-30 of 234 in total

View Taxonomy