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L3_105_000M1_scaffold_2310

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2310_1
unknown

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comp(1..183)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_105_000M1_scaffold_2310_2
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(232..2712)
DNA (2481bp) protein (827aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KUL6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB73606.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
hypothetical protein
L3_105_000M1_scaffold_2310_3
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2725..3546)
DNA (822bp) protein (274aa)
ABC-type sugar transport system, permease component n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EHZ5_THECK
sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIQ63104.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L3_105_000M1_scaffold_2310_4
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3574..4440)
DNA (867bp) protein (289aa)
Sugar transport system (Permease) (Binding protein dependent transporter) n=2 Tax=Paenibacillus mucilaginosus RepID=F8FE93_PAEMK
sugar transporter
Sugar transporter {ECO:0000313|EMBL:AFH63794.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
L3_105_000M1_scaffold_2310_5
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4556..6028)
DNA (1473bp) protein (491aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EHU5_THECK
sugar ABC transporter substrate-binding protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AGA59266.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
L3_105_000M1_scaffold_2310_6
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6060..7580)
DNA (1521bp) protein (507aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:ADN02417.1}; EC=3.2.1.55 {ECO:0000313|EMBL:ADN02417.1};; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
Alpha-N-arabinofuranosidase n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RTP2_SPITD
L3_105_000M1_scaffold_2310_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(7676..8701)
DNA (1026bp) protein (342aa)
Khg/kdpg family aldolase/carbohydrate kinase pfkb family n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EJN6_9FIRM
Khg/kdpg family aldolase/carbohydrate kinase pfkb family {ECO:0000313|EMBL:CCX92895.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
khg/kdpg family aldolase/carbohydrate kinase
L3_105_000M1_scaffold_2310_8
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(8698..9372)
DNA (675bp) protein (225aa)
Entner-Doudoroff aldolase (EC:4.1.3.16 4.1.2.14)
KDPG and KHG aldolase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EWD5_9FIRM
KDPG and KHG aldolase {ECO:0000313|EMBL:CCX92897.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_105_000M1_scaffold_2310_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9395..10507)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WZM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99592.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_105_000M1_scaffold_2310_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10923..11837
DNA (915bp) protein (305aa)
Putative transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5Q2_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:EKQ55013.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ArsR family transcriptional regulator
L3_105_000M1_scaffold_2310_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12103..12360)
DNA (258bp) protein (86aa)
HTH domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSZ5_9FIRM
HTH domain.
HTH domain {ECO:0000313|EMBL:CBK96214.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_105_000M1_scaffold_2310_12
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12373..14169)
DNA (1797bp) protein (599aa)
Trag/trad family protein putative n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJ56_9CLOT
Trag/trad family protein putative {ECO:0000313|EMBL:CCY66803.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
trag/trad family protein
L3_105_000M1_scaffold_2310_13

Not on your lists

comp(14148..15098)
DNA (951bp) protein (317aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U5H3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC75279.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_105_000M1_scaffold_2310_14
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15202..15444
DNA (243bp) protein (81aa)
Prevent-host-death family protein n=2 Tax=Eubacterium RepID=B0MLW6_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:CDC45481.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Phd_YefM.
L3_105_000M1_scaffold_2310_15
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15441..15830
DNA (390bp) protein (130aa)
Death-on-curing family protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RK82_ACIFV
death-on-curing family protein
Death-on-curing family protein {ECO:0000313|EMBL:ADB47484.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L3_105_000M1_scaffold_2310_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15845..17005)
DNA (1161bp) protein (387aa)
Sel1 repeat n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JSZ4_9FIRM
Sel1 repeat.
Sel1 repeat {ECO:0000313|EMBL:CBK96213.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying 16 items

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