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L3_105_000M1_scaffold_1196

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1196_1
unknown

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comp(1..369)
DNA (369bp) protein (123aa)

This feature has no annotations

L3_105_000M1_scaffold_1196_2
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(475..3465)
DNA (2991bp) protein (997aa)
Uncharacterized protein id=2947928 bin=GWF2_Planctomycetes_42_9 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Planctomycetes_42_9_curated
L3_105_000M1_scaffold_1196_3
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3564..4946)
DNA (1383bp) protein (461aa)
Glycosyl hydrolase family 43 n=1 Tax=Clostridium sp. CAG:448 RepID=R6SKR9_9CLOT
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDC60515.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_105_000M1_scaffold_1196_4
unknown

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comp(4971..6539)
DNA (1569bp) protein (523aa)

This feature has no annotations

L3_105_000M1_scaffold_1196_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6770..7795)
DNA (1026bp) protein (342aa)
Putative HTH-type transcriptional repressor PurR n=1 Tax=Clostridium ultunense Esp RepID=M1Z574_9CLOT
Putative HTH-type transcriptional repressor PurR {ECO:0000313|EMBL:CCQ98035.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
LacI family transcriptional regulator
L3_105_000M1_scaffold_1196_6
Paenibacillus sp. FSL R7-277, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7814..8746)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036038E0
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ETT75707.1}; TaxID=1227352 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-277.;"
binding-protein-dependent transport system inner membrane protein
L3_105_000M1_scaffold_1196_7
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(8762..9709)
DNA (948bp) protein (316aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TDC5_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDC70230.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
binding-protein-dependent transport system inner membrane protein
L3_105_000M1_scaffold_1196_8
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9734..12424)
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037AC7BD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY74315.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
L3_105_000M1_scaffold_1196_9
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(12450..13073)
DNA (624bp) protein (208aa)
NHL repeat containing protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYS7_MAHA5
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:AEE95672.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_105_000M1_scaffold_1196_10
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(13097..14590)
DNA (1494bp) protein (498aa)
NHL repeat containing protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYS7_MAHA5
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:AEE95672.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L3_105_000M1_scaffold_1196_11
GWF2_RBX1_35_9_curated, RBX1, Bacteria

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comp(14600..15469)
DNA (870bp) protein (290aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family id=4109962 bin=GWF2_OP9_related_35_9 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
CUT1 family carbohydrate ABC transporter membrane protein 2
Tax=GWF2_RBX1_35_9_curated
L3_105_000M1_scaffold_1196_12
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15473..16411)
DNA (939bp) protein (313aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W1K1_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDD03290.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
sugar ABC transporter permease
L3_105_000M1_scaffold_1196_13
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16454..19309)
DNA (2856bp) protein (952aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036DE2D1
sugar ABC transporter substrate-binding protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AGA58388.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
L3_105_000M1_scaffold_1196_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19712..21058)
DNA (1347bp) protein (449aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
beta-glucosidase (EC:3.2.1.21)
Beta-galactosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4L0_9FIRM
L3_105_000M1_scaffold_1196_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21477..21767)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82632.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L3_105_000M1_scaffold_1196_16
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21970..23607)
DNA (1638bp) protein (546aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERU7_9FIRM
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CDE05345.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_105_000M1_scaffold_1196_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23654..24238)
DNA (585bp) protein (195aa)
Chromate transport protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7M8_9FIRM
Chromate transport protein {ECO:0000313|EMBL:EDS12531.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
chrA2; chromate transporter ChrA2
L3_105_000M1_scaffold_1196_18
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(24240..24803)
DNA (564bp) protein (188aa)
Chromate transporter ChrA1 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJ49_ACEWD
chrA1; chromate transporter ChrA1
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
L3_105_000M1_scaffold_1196_19
unknown

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comp(25018..25521)
DNA (504bp) protein (168aa)

This feature has no annotations

L3_105_000M1_scaffold_1196_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25780..26178)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31314.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
putative membrane protein
L3_105_000M1_scaffold_1196_21
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26201..26569)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31315.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
conserved hypothetical protein
L3_105_000M1_scaffold_1196_22
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26798..27115)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEX68753.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
L-rhamnose 1-epimerase
L3_105_000M1_scaffold_1196_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27166..27636)
DNA (471bp) protein (157aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
mgsA2; methylglyoxal synthase MgsA2 (EC:4.2.3.3)
methylglyoxal synthase n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B6E3AD
L3_105_000M1_scaffold_1196_24
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27693..28649)
DNA (957bp) protein (319aa)
ROK family protein (putative glucokinase) (EC:2.7.1.2)
glucokinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002F4961D
Glucokinase {ECO:0000313|EMBL:EWM52464.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
L3_105_000M1_scaffold_1196_25
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28689..29669)
DNA (981bp) protein (327aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase class I n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ86_9FIRM
Mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CDE81126.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L3_105_000M1_scaffold_1196_26
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30076..31572
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6V2_9CLOT
L3_105_000M1_scaffold_1196_27
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(31667..33970)
DNA (2304bp) protein (768aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.25)
Putative uncharacterized protein id=3224452 bin=GWF2_Lentisphaerae_52_8 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_52_8_curated
L3_105_000M1_scaffold_1196_28
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(34062..36347)
DNA (2286bp) protein (762aa)
Glycosyltransferase 36 id=2745289 bin=GWF2_Lentisphaerae_50_93 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
L3_105_000M1_scaffold_1196_29
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36375..37208)
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3E9J6_GEOS4
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACX62647.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
L3_105_000M1_scaffold_1196_30
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(37221..38057)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI000381E15B
ABC transporter permease
Tax=GWC2_Clostridiales_40_7_curated
Displaying 30 items

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