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L3_105_000M1_scaffold_4751

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_4751_1
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(499..672)
-----------------
DNA (174bp)
protein (58aa)
Putative uncharacterized protein n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDI8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK88260.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L3_105_000M1_scaffold_4751_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(869..3004)
-----------------
DNA (2136bp)
protein (712aa)
Alanine racemase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8I7_9FIRM
alanine racemase
Alanine racemase {ECO:0000313|EMBL:CBL15932.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_105_000M1_scaffold_4751_3
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2991..3755)
-----------------
DNA (765bp)
protein (255aa)
VanXYG2 n=1 Tax=Enterococcus faecalis RepID=Q30BF0_ENTFL
Bifunctional D,D-dipeptidase/D,D-carboxypeptidase {ECO:0000313|EMBL:AIR95938.1}; TaxID=1311 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae.;"
peptidase M15
L3_105_000M1_scaffold_4751_4
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3752..4804)
-----------------
DNA (1053bp)
protein (351aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1328 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus.;"
D-alanine--D-alanine ligase n=3 Tax=Firmicutes RepID=Q6WRY5_ENTFL
vanB; D-alanine--D-alanine ligase
L3_105_000M1_scaffold_4751_5
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4890..5711)
-----------------
DNA (822bp)
protein (274aa)
VanW like family protein n=1 Tax=Clostridium difficile P19 RepID=T4LC21_CLODI
vancomycin resistance protein
Uncharacterized protein {ECO:0000313|EMBL:AIK22025.1}; TaxID=1328 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus.;"
L3_105_000M1_scaffold_4751_6
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5852..6997)
-----------------
DNA (1146bp)
protein (382aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MNQ9_9FIRM
two-component sensor histidine kinase
L3_105_000M1_scaffold_4751_7
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6984..7682)
-----------------
DNA (699bp)
protein (233aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NM44_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ05260.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
DNA-binding response regulator
L3_105_000M1_scaffold_4751_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7684..7899)
-----------------
DNA (216bp)
protein (72aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8I2_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL15927.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_105_000M1_scaffold_4751_9
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8278..8793)
-----------------
DNA (516bp)
protein (172aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DRL1_CLOS4
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ERI99515.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
RNA polymerase sigma-B factor
Displaying 9 items

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