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L3_105_000M1_scaffold_2880

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2880_1
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(221..496)
DNA (276bp) protein (92aa)
DNA polymerase III subunit alpha n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BNA9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ62598.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L3_105_000M1_scaffold_2880_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(684..1535)
DNA (852bp) protein (284aa)
Conserved repeat protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3I8_9FIRM
Conserved repeat protein {ECO:0000313|EMBL:CCX74810.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
conserved repeat domain
L3_105_000M1_scaffold_2880_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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1690..2298
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DD69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74812.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative hydrolase
L3_105_000M1_scaffold_2880_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(2399..3238)
DNA (840bp) protein (280aa)
DegV family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7L6_9FIRM
DegV family protein {ECO:0000313|EMBL:CCX74814.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
degV family protein
L3_105_000M1_scaffold_2880_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(3235..3693)
DNA (459bp) protein (153aa)
Transcriptional regulator MarR family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFX8_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCX74816.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_2880_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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3952..4578
DNA (627bp) protein (209aa)
Putative manganese efflux pump MntP n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DD73_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Predicted membrane protein
L3_105_000M1_scaffold_2880_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(4660..5670)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
asnA; asparagine synthetase A (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7M1_9FIRM
L3_105_000M1_scaffold_2880_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(6099..7289)
DNA (1191bp) protein (397aa)
Aminotransferase class I/II n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFY3_9FIRM
Aminotransferase class I/II {ECO:0000313|EMBL:CCX74821.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative aminotransferase
L3_105_000M1_scaffold_2880_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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7630..8700
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74823.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_2880_10
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8947..9171)
DNA (225bp) protein (75aa)
ABC transporter ATP-binding protein HlyB family n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EKK9_9FIRM
ABC transporter ATP-binding protein HlyB family {ECO:0000313|EMBL:CDE02971.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ABC transporter
L3_105_000M1_scaffold_2880_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(9253..9588)
DNA (336bp) protein (112aa)
Branched-chain amino acid transport protein AzlD n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3K2_9FIRM
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:CCX74825.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
azlD; branched-chain amino acid transporter
L3_105_000M1_scaffold_2880_12
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9579..10277)
DNA (699bp) protein (233aa)
AzlC family protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6ULZ0_9FIRM
putative branched-chain amino acid transport protein
AzlC family protein {ECO:0000313|EMBL:CDC71802.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_105_000M1_scaffold_2880_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

10469..11077
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74835.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_2880_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

11074..12243
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DD91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74837.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
cation diffusion facilitator family transporter
L3_105_000M1_scaffold_2880_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(12279..12611)
DNA (333bp) protein (111aa)
Putative oxidoreductase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7P3_9FIRM
Putative oxidoreductase {ECO:0000313|EMBL:CCX74839.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative oxidoreductase
L3_105_000M1_scaffold_2880_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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12665..13366
DNA (702bp) protein (234aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
NAD-dependent deacetylase (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3L5_9FIRM
Displaying 16 items

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