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L3_105_000M1_scaffold_103

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Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_103_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

2..301
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29300.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ABC transporter
L3_105_000M1_scaffold_103_2
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

298..846
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AJW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX41087.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L3_105_000M1_scaffold_103_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(1822..3567)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73957.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_103_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(3664..4893)
DNA (1230bp) protein (410aa)
putative RNA methyltransferase (EC:2.1.1.-)
Putative RNA methyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D569_9FIRM
Putative RNA methyltransferase {ECO:0000313|EMBL:CCX73954.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_103_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5049..7058
DNA (2010bp) protein (670aa)
spoIIE; putative stage II sporulation protein E (EC:3.1.3.16)
Putative stage II sporulation protein E n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZ30_9FIRM
Putative stage II sporulation protein E {ECO:0000313|EMBL:CDB26466.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_105_000M1_scaffold_103_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

7121..7387
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72363.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_103_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(7540..8541)
DNA (1002bp) protein (334aa)
putative L-asparaginase (EC:3.5.1.1)
L-asparaginase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D674_9FIRM
L-asparaginase {ECO:0000313|EMBL:CCX72362.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_103_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(8595..9680)
DNA (1086bp) protein (362aa)
Putative hydrolase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D929_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CCX72361.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative hydrolase
L3_105_000M1_scaffold_103_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9693..10175)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25496.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_105_000M1_scaffold_103_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(10250..11026)
DNA (777bp) protein (259aa)
Phosphoesterase family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWT3_9FIRM
Phosphoesterase family protein {ECO:0000313|EMBL:CCX72360.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_103_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(11169..11597)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72359.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_103_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(11731..13281)
DNA (1551bp) protein (517aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWU2_9FIRM
L3_105_000M1_scaffold_103_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(13479..14222)
DNA (744bp) protein (248aa)
Putative peptidoglycan hydrolase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D669_9FIRM
Putative peptidoglycan hydrolase {ECO:0000313|EMBL:CCX72357.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative peptidoglycan hydrolase
L3_105_000M1_scaffold_103_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

14505..14906
DNA (402bp) protein (134aa)
Putative Fur family transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWX2_9FIRM
Putative Fur family transcriptional regulator {ECO:0000313|EMBL:CCX72393.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative Fur family transcriptional regulator
L3_105_000M1_scaffold_103_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

14903..15904
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72392.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_105_000M1_scaffold_103_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

15904..16611
DNA (708bp) protein (236aa)
Putative zinc ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D964_9FIRM
Putative zinc ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX72391.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative zinc ABC transporter ATP-binding protein
L3_105_000M1_scaffold_103_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

16608..17420
DNA (813bp) protein (271aa)
ABC-type Mn2+/Zn2+ transport systems permease components n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWW5_9FIRM
ABC-type Mn2+/Zn2+ transport systems permease components {ECO:0000313|EMBL:CCX72390.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC transporter permease protein
L3_105_000M1_scaffold_103_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

17665..18126
DNA (462bp) protein (154aa)
Ribosome maturation factor RimP n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0T3_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_103_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

18157..19215
DNA (1059bp) protein (353aa)
Transcription elongation protein NusA n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWW7_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
nusA; transcription elongation protein NusA
L3_105_000M1_scaffold_103_20
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

19242..19508
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72387.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_103_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

19526..20107
DNA (582bp) protein (194aa)
Ribosomal protein L7Ae n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D959_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:CCX72386.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_103_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

20158..22476
DNA (2319bp) protein (773aa)
Translation initiation factor IF-2 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWV9_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
infB; translation initiation factor IF-2
L3_105_000M1_scaffold_103_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

22903..23292
DNA (390bp) protein (130aa)
Ribosome-binding factor A n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0T2_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rbfA; ribosome-binding factor A
L3_105_000M1_scaffold_103_24
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

23306..24259
DNA (954bp) protein (318aa)
Putative hydrolase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWW2_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CCX72383.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative hydrolase
L3_105_000M1_scaffold_103_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

24272..25141
DNA (870bp) protein (290aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
truB; tRNA pseudouridine synthase (EC:5.4.99.-)
tRNA pseudouridine synthase B n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D696_9FIRM
L3_105_000M1_scaffold_103_26
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

25142..26056
DNA (915bp) protein (305aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ribC; flavokinase/FAD synthetase (EC:2.7.1.26 2.7.7.2)
Flavokinase/FAD synthetase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D951_9FIRM
L3_105_000M1_scaffold_103_27
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

26274..27302
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72380.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_103_28
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(27396..28766)
DNA (1371bp) protein (457aa)
Uncharacterized FAD-dependent dehydrogenases n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0S7_9FIRM
Uncharacterized FAD-dependent dehydrogenases {ECO:0000313|EMBL:CCX72379.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Uncharacterized FAD-dependent dehydrogenases
L3_105_000M1_scaffold_103_29
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

28979..29809
DNA (831bp) protein (277aa)
Thymidylate synthase {ECO:0000256|SAAS:SAAS00215270}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00273274};; EC=2.1.1.45 {ECO:0000256|SAAS:SAAS00215290};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWV8_9FIRM
L3_105_000M1_scaffold_103_30
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

29820..30311
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D690_9FIRM
Displaying items 1-30 of 117 in total

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