ggKbase home page

L3_105_000M1_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_489_1
Gemella sanguinis, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..528)
DNA (528bp) protein (176aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=562983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella sanguinis M325.;"
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Gemella sanguinis M325 RepID=F3A9R9_9BACL
L3_105_000M1_scaffold_489_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(844..1482)
DNA (639bp) protein (213aa)
Transcriptional regulator GntR family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D224_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCX74243.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
GntR family transcriptional regulator
L3_105_000M1_scaffold_489_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

1569..2501
DNA (933bp) protein (311aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DE88_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCX74241.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative membrane protein
L3_105_000M1_scaffold_489_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(2546..3184)
DNA (639bp) protein (213aa)
Transcriptional regulator GntR family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D5Z8_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCX74239.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
GntR family transcriptional regulator
L3_105_000M1_scaffold_489_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(3439..4224)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DBP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74237.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

4422..5387
DNA (966bp) protein (322aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1Y3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCX74235.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_489_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

5384..6763
DNA (1380bp) protein (460aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D217_9FIRM
selA; L-seryl-tRNA(Sec) selenium transferase
L3_105_000M1_scaffold_489_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

6760..8670
DNA (1911bp) protein (637aa)
selB; selenocysteine-specific translation elongation factor SelB (EC:2.7.7.4)
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1Y0_9FIRM
Selenocysteine-specific translation elongation factor SelB {ECO:0000313|EMBL:CCX74230.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

8973..9341
DNA (369bp) protein (123aa)
Putative GrdX protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DE78_9FIRM
Putative GrdX protein {ECO:0000313|EMBL:CCX74226.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
component of glycine reductase complex
L3_105_000M1_scaffold_489_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

9786..11072
DNA (1287bp) protein (429aa)
Glycine reductase proprotein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D209_9FIRM
Glycine reductase proprotein {ECO:0000313|EMBL:CCX74223.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
grdE; glycine reductase proprotein
L3_105_000M1_scaffold_489_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

11090..12130
DNA (1041bp) protein (347aa)
Selenoprotein B glycine/betaine/sarcosine/D-proline reductase family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DE75_9FIRM
Selenoprotein B glycine/betaine/sarcosine/D-proline reductase family {ECO:0000313|EMBL:CCX74221.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
glycine/betaine/sarcosine/D-proline reductase family selenoprotein B
L3_105_000M1_scaffold_489_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

12161..12406
DNA (246bp) protein (82aa)
Selenoprotein B glycine/betaine/sarcosine/D-proline reductase family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D5X9_9FIRM
Selenoprotein B glycine/betaine/sarcosine/D-proline reductase family {ECO:0000313|EMBL:CCX74219.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
glycine/betaine/sarcosine/D-proline reductase family selenoprotein B
L3_105_000M1_scaffold_489_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

12421..13365
DNA (945bp) protein (315aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DBM2_9FIRM
Thioredoxin reductase {ECO:0000313|EMBL:CCX74217.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

13388..13705
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1W9_9FIRM
Thioredoxin {ECO:0000313|EMBL:CCX74215.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Thioredoxin domain-containing protein
L3_105_000M1_scaffold_489_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

13776..13907
DNA (132bp) protein (44aa)
glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.4)
Glycine/sarcosine/betaine reductase complex component A n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D200_9FIRM
Glycine/sarcosine/betaine reductase complex component A {ECO:0000313|EMBL:CCX74213.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

13923..14252
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DE66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74211.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Glycine reductase complex selenoprotein A
L3_105_000M1_scaffold_489_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

14365..15909
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74208.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_489_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

15912..17063
DNA (1152bp) protein (384aa)
Fatty acid/phospholipid synthesis protein PlsX n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DE60_9FIRM
Fatty acid/phospholipid synthesis protein PlsX {ECO:0000313|EMBL:CCX74206.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
fatty acid/phospholipid biosynthesis protein
L3_105_000M1_scaffold_489_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

17130..17252
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D5W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74204.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_20
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

17372..18949
DNA (1578bp) protein (526aa)
Cardiolipin synthetase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DBK6_9FIRM
Cardiolipin synthetase {ECO:0000313|EMBL:CCX74202.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_489_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(19297..20931)
DNA (1635bp) protein (545aa)
60 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1V8_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
groEL; GroEL protein
L3_105_000M1_scaffold_489_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(21092..21376)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1V0_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
groES; GroES protein
L3_105_000M1_scaffold_489_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(21520..22461)
DNA (942bp) protein (314aa)
Putative BmrU protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D5U9_9FIRM
Putative BmrU protein {ECO:0000313|EMBL:CCX74189.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_489_24
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(22581..23696)
DNA (1116bp) protein (372aa)
putative RNA methylase (EC:2.1.1.-)
Putative RNA methylase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1X9_9FIRM
Putative RNA methylase {ECO:0000313|EMBL:CCX74188.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

23886..24272
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DBJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74187.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
GntR family transcriptional regulator
L3_105_000M1_scaffold_489_26
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

24269..24976
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DE42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74186.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_27
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

24966..25484
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74185.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_28
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

25499..26227
DNA (729bp) protein (243aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D5U4_9FIRM
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX74184.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC transporter
L3_105_000M1_scaffold_489_29
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

26229..27689
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74183.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_489_30
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

27942..28196
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DBI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74182.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Displaying items 1-30 of 66 in total

View Taxonomy