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L3_105_000M1_scaffold_724

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_724_1
unknown

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1..432
DNA (432bp) protein (144aa)

This feature has no annotations

L3_105_000M1_scaffold_724_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(446..871)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74868.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
flavodoxin
L3_105_000M1_scaffold_724_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(906..1451)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DDC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74867.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_724_4
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(1466..1747)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DG28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74866.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_724_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(2175..3485)
DNA (1311bp) protein (437aa)
UPF0597 protein BN795_00485 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3N9_9FIRM
UPF0597 protein BN795_00485 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_724_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(3576..3932)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74864.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_724_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(3982..5205)
DNA (1224bp) protein (408aa)
Bacterial transcriptional activator domain protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3T4_9FIRM
Bacterial transcriptional activator domain protein {ECO:0000313|EMBL:CCX74863.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
SARP family transcriptional regulator
L3_105_000M1_scaffold_724_8
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5470..10806)
DNA (5337bp) protein (1779aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6BBS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA50797.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
calcineurin-like phosphoesterase
L3_105_000M1_scaffold_724_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(11382..13085)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DDJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73966.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_724_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(13085..13435)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73968.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_724_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

13610..14644
DNA (1035bp) protein (345aa)
Ornithine carbamoyltransferase {ECO:0000256|SAAS:SAAS00106174}; EC=2.1.3.3 {ECO:0000256|SAAS:SAAS00106174};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D190_9FIRM
L3_105_000M1_scaffold_724_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

14651..16024
DNA (1374bp) protein (458aa)
Amino acid permease-associated region n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAX8_9FIRM
Amino acid permease-associated region {ECO:0000313|EMBL:CCX73972.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
amino acid permease
L3_105_000M1_scaffold_724_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

16044..17141
DNA (1098bp) protein (366aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Agmatine deiminase (EC:3.5.3.12)
Putative agmatine deiminase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1A6_9FIRM
L3_105_000M1_scaffold_724_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(17356..18315)
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2A5_9FIRM
L3_105_000M1_scaffold_724_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(18403..19539)
DNA (1137bp) protein (379aa)
putative glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
Putative glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DEJ0_9FIRM
Putative glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:CCX74331.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_724_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

19801..20325
DNA (525bp) protein (175aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D269_9FIRM
putative RNA methyltransferase
L3_105_000M1_scaffold_724_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

20356..21549
DNA (1194bp) protein (398aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D687_9FIRM
L3_105_000M1_scaffold_724_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

21618..22391
DNA (774bp) protein (258aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2A2_9FIRM
L3_105_000M1_scaffold_724_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

22411..23922
DNA (1512bp) protein (504aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DBX7_9FIRM
L3_105_000M1_scaffold_724_20
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

23998..24741
DNA (744bp) protein (248aa)
Putative metalloendopeptidase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DEI5_9FIRM
Putative metalloendopeptidase {ECO:0000313|EMBL:CCX74326.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative metalloendopeptidase
L3_105_000M1_scaffold_724_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

24906..26084
DNA (1179bp) protein (393aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DF55_9FIRM
L3_105_000M1_scaffold_724_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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26438..30337
DNA (3900bp) protein (1300aa)
RND transporter HAE1/HME family permease protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HL45_9FIRM
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDB26682.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
acriflavin resistance protein
L3_105_000M1_scaffold_724_23
unknown

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30476..30580
DNA (105bp) protein (35aa)

This feature has no annotations

L3_105_000M1_scaffold_724_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30777..39356)
DNA (8580bp) protein (2860aa)
Putative listeria/Bacterioides repeat-containing domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MEW7_9FIRM
Putative listeria/Bacterioides repeat-containing domain protein {ECO:0000313|EMBL:CCY90265.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_105_000M1_scaffold_724_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(39593..40756)
DNA (1164bp) protein (388aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Probable butyrate kinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3E2_9FIRM
butyrate kinase
L3_105_000M1_scaffold_724_26
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(40828..41595)
DNA (768bp) protein (256aa)
exoA; exodeoxyribonuclease (EC:3.1.11.2)
Exodeoxyribonuclease n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCU6_9FIRM
Exodeoxyribonuclease {ECO:0000313|EMBL:CCX74687.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_724_27
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


41834..43798
DNA (1965bp) protein (655aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFK6_9FIRM
Displaying 27 items

View Taxonomy