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L3_105_000M1_scaffold_3134

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3134_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(237..1811)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4R6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75146.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polysaccharide biosynthesis protein
L3_105_000M1_scaffold_3134_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1991..3562
DNA (1572bp) protein (524aa)
Transporter, lactate permease (LctP) family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAS7_9ACTN
Transporter, lactate permease (LctP) family {ECO:0000313|EMBL:EBA39244.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L-lactate transport
L3_105_000M1_scaffold_3134_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3813..5483
DNA (1671bp) protein (557aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAS8_9ACTN
L3_105_000M1_scaffold_3134_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5711..6430
DNA (720bp) protein (240aa)
B3/4 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAS9_9ACTN
B3/4 domain protein {ECO:0000313|EMBL:EBA39246.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_105_000M1_scaffold_3134_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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6602..7051
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT0_9ACTN
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EBA39247.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, MarR family
L3_105_000M1_scaffold_3134_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7066..8025
DNA (960bp) protein (320aa)
EDD domain protein, DegV family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT1_9ACTN
EDD domain protein, DegV family {ECO:0000313|EMBL:EBA39248.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
degV family protein
L3_105_000M1_scaffold_3134_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8105..8425
DNA (321bp) protein (107aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EBA39249.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EBA39249.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT2_9ACTN
methylated-DNA--protein-cysteine methyltransferase
L3_105_000M1_scaffold_3134_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(8818..9867)
DNA (1050bp) protein (350aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:EBA39250.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EBA39250.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT3_9ACTN
L3_105_000M1_scaffold_3134_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(10027..11226)
DNA (1200bp) protein (400aa)
Glycosyltransferase, group 4 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAT4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75188.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glycosyl transferase family protein
L3_105_000M1_scaffold_3134_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11751..12689
DNA (939bp) protein (313aa)
Radical SAM domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAK6_9ACTN
Radical SAM domain protein {ECO:0000313|EMBL:CDA35875.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Radical SAM domain protein
Displaying 10 items

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