ggKbase home page

L3_105_000M1_scaffold_2039

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2039_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1137
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75667.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
succinate dehydrogenase
L3_105_000M1_scaffold_2039_2
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1141..2109
DNA (969bp) protein (323aa)
Phosphotransferase enzyme family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AZD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ88970.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
phosphotransferase
L3_105_000M1_scaffold_2039_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2267..2938
DNA (672bp) protein (224aa)
transcriptional regulator n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000363750C
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EXG85434.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
transcriptional regulator
L3_105_000M1_scaffold_2039_4
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2935..4014
DNA (1080bp) protein (360aa)
phoR1; alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.13.3)
hypothetical protein n=1 Tax=Lactobacillus farciminis RepID=UPI000219746F
Histidine kinase {ECO:0000313|EMBL:KJS47893.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
L3_105_000M1_scaffold_2039_5
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

4091..5119
DNA (1029bp) protein (343aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CGG9_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CCX67050.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
NAD-dependent epimerase/dehydratase
L3_105_000M1_scaffold_2039_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5116..5955
DNA (840bp) protein (280aa)
DegV family EDD domain-containing protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUL7_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:CDB41543.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_105_000M1_scaffold_2039_7
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5963..6604)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BLT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61889.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Predicted membrane protein
L3_105_000M1_scaffold_2039_8
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(6773..7645)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YAX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD31030.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L3_105_000M1_scaffold_2039_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7678..8559)
DNA (882bp) protein (294aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
4-hydroxy-tetrahydrodipicolinate synthase n=7 Tax=Clostridium clostridioforme RepID=N9WZV2_9CLOT
dihydrodipicolinate synthase
L3_105_000M1_scaffold_2039_10
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8616..9719)
DNA (1104bp) protein (368aa)
Beta-lactamase n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D8G2_PAESJ
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AIQ67666.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
L3_105_000M1_scaffold_2039_11
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9978..10997
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y8P0_ANEAE
Uncharacterized protein {ECO:0000313|EMBL:ERI07201.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
L3_105_000M1_scaffold_2039_12
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10987..12339
DNA (1353bp) protein (451aa)
Helicase protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y4W7_ANEAE
Helicase protein {ECO:0000313|EMBL:ERI07202.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
helicase domain-containing protein
L3_105_000M1_scaffold_2039_13
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

12290..13579
DNA (1290bp) protein (430aa)
Immunoglobulin-binding regulator A family protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WY71_ANEAE
Putative immunoglobulin-binding regulator A {ECO:0000313|EMBL:EUB31019.1}; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
phosphoadenosine phosphosulfate reductase
L3_105_000M1_scaffold_2039_14
unknown

Not on your lists

13554..13904
DNA (351bp) protein (117aa)

This feature has no annotations

L3_105_000M1_scaffold_2039_15
Enterococcus saccharolyticus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13891..14457
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=2 Tax=Enterococcus RepID=C8ZX28_ENTGA
Uncharacterized protein {ECO:0000313|EMBL:EHG30352.1}; TaxID=742813 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus saccharolyticus 30_1.;"
ParB-like nuclease
L3_105_000M1_scaffold_2039_16
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14653..15579
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SCY4_9BACL
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHQ63058.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
L3_105_000M1_scaffold_2039_17
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15606..16496
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037550C9
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS99200.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L3_105_000M1_scaffold_2039_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16551..18137
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003615EFE
Uncharacterized protein {ECO:0000313|EMBL:EGN39571.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
extracellular solute-binding protein
L3_105_000M1_scaffold_2039_19
unknown

Not on your lists

18257..19108
DNA (852bp) protein (284aa)

This feature has no annotations

Displaying 19 items

View Taxonomy