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L3_105_000M1_scaffold_2840

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2840_1
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..184)
DNA (183bp) protein (61aa)
ABC transporter ATP-binding protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WP64_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP26091.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_105_000M1_scaffold_2840_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(189..3002)
DNA (2814bp) protein (938aa)
Putative efflux ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7G3_9CLOT
Putative efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD74036.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_105_000M1_scaffold_2840_3
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3016..4110)
DNA (1095bp) protein (365aa)
Membrane-fusion protein-like protein n=1 Tax=Paenibacillus sp. P22 RepID=T2LSR4_9BACL
RND transporter {ECO:0000313|EMBL:KIL41217.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
L3_105_000M1_scaffold_2840_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4097..5218)
DNA (1122bp) protein (374aa)
Efflux transporter RND family MFP subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9M5_9CLOT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD74038.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
secretion protein
L3_105_000M1_scaffold_2840_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5230..6327)
DNA (1098bp) protein (366aa)
Secretion protein HlyD family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YSS2_9FIRM
Secretion protein HlyD family {ECO:0000313|EMBL:CDD34469.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
RND family efflux transporter MFP subunit
L3_105_000M1_scaffold_2840_6
unknown

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comp(6336..7730)
DNA (1395bp) protein (465aa)

This feature has no annotations

L3_105_000M1_scaffold_2840_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7819..10005)
DNA (2187bp) protein (729aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B0A6_9CLOT
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:ERI71594.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
alpha-L-rhamnosidase
L3_105_000M1_scaffold_2840_8
unknown

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comp(10097..10819)
DNA (723bp) protein (241aa)

This feature has no annotations

L3_105_000M1_scaffold_2840_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11061..13400)
DNA (2340bp) protein (780aa)
ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W528_9CLOT
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EOQ40015.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_105_000M1_scaffold_2840_10
unknown

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comp(13561..13965)
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 10 items

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