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L3_105_000M1_scaffold_4196

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_4196_1
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..161)
DNA (159bp) protein (53aa)
DNA replication and repair protein RecF n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSI6_CELLD
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_105_000M1_scaffold_4196_2

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comp(158..1975)
DNA (1818bp) protein (606aa)
GTP-binding protein TypA/BipA n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IA89_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:AHF25192.1}; TaxID=1393460 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1578.;"
typA; GTP-binding protein TypA/BipA homolog
L3_105_000M1_scaffold_4196_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1978..3603)
DNA (1626bp) protein (542aa)
Peptide chain release factor 3 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I4B7_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
prfC; peptide chain release factor 3
L3_105_000M1_scaffold_4196_4
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3663..4130)
DNA (468bp) protein (156aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HWS4_9FIRM
CMP/dCMP deaminase zinc-binding protein
L3_105_000M1_scaffold_4196_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4295..5779
DNA (1485bp) protein (495aa)
UPF0371 protein CLOLEP_02469 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEN2_9CLOT
UPF0371 protein BN545_01305 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_4196_6
unknown

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5872..6513
DNA (642bp) protein (214aa)

This feature has no annotations

L3_105_000M1_scaffold_4196_7
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6704..9043
DNA (2340bp) protein (780aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D9C1EB
Uncharacterized protein {ECO:0000313|EMBL:KHS57781.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
glycosyltransferase
L3_105_000M1_scaffold_4196_8

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9098..9886
DNA (789bp) protein (263aa)
L-rhamnose isomerase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LGI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKO03500.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
L-rhamnose isomerase
Displaying 8 items

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