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L3_105_000M1_scaffold_3336

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3336_1
unknown

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3..296
DNA (294bp) protein (98aa)

This feature has no annotations

L3_105_000M1_scaffold_3336_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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277..690
DNA (414bp) protein (138aa)
hypothetical protein id=5094461 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
L3_105_000M1_scaffold_3336_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(612..1634)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTI3_9FIRM
D-aminopeptidase {ECO:0000313|EMBL:KJF39665.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
peptidase S58 DmpA
L3_105_000M1_scaffold_3336_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1697..2053)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5M8_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rplT; 50S ribosomal protein L20
L3_105_000M1_scaffold_3336_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2069..2266)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBZ0_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
50S ribosomal protein L35
L3_105_000M1_scaffold_3336_6
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2373..2870)
DNA (498bp) protein (166aa)
Translation initiation factor IF-3 n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MRK0_CALBD
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=521460 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320); (Anaerocellum thermophilum).;"
L3_105_000M1_scaffold_3336_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3190..3855
DNA (666bp) protein (222aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent beta subunit n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBJ1_9FIRM
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CDE47872.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_3336_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3876..4691
DNA (816bp) protein (272aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9C3_9FIRM
L-serine ammonia-lyase {ECO:0000313|EMBL:CDE47873.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L3_105_000M1_scaffold_3336_9
unknown

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4744..5472
DNA (729bp) protein (243aa)

This feature has no annotations

L3_105_000M1_scaffold_3336_10
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5631..6926)
DNA (1296bp) protein (432aa)
Chloride transporter, ClC family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DEF3_CLOS4
Chloride transporter, ClC family {ECO:0000313|EMBL:ERJ01190.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Cl-channel voltage-gated family protein
L3_105_000M1_scaffold_3336_11
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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7228..10962
DNA (3735bp) protein (1245aa)
recD2; ATP-dependent RecD-like DNA helicase (EC:3.6.4.12)
RecD2 protein {ECO:0000313|EMBL:AIZ56944.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AIZ56944.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
HRDC domain protein n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YJU8_9EURY
L3_105_000M1_scaffold_3336_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11008..12375)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78510.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
putative efflux protein, MATE family
Displaying 12 items

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