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L3_105_000M1_scaffold_3449_5

Organism: dasL3_105_000M1_metabat_metabat_55_fa_fa

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3427..4581)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWP4_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 364.0
  • Bit_score: 546
  • Evalue 1.80e-152
RNA polymerase, sigma 38 subunit, RpoS similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 364.0
  • Bit_score: 546
  • Evalue 5.20e-153
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 364.0
  • Bit_score: 546
  • Evalue 2.60e-152

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Taxonomy

[Clostridium] clariflavum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGGCTGCTCGCGGAACTGGATCGTTTTTGACCGGTCGAAAGGAGTGATTCACTTGAGCAAGCTGAATGCAGAGGCCATGCAGGCCCGTGTTAACGAACTGATTGAGACCGGTAAAGCCAAGGGCGTATTGACGTATAACGAAATTATAGAAACGCTGGGGGAAACCGAGATCGTTTCTGAACAGTTTGATAAAATTCTGGACGCGCTTTCTGCCATTGGCGTGGAAGTTGTGAAAGATGAACCCATCGAGGAGCCGGAACCGGAACCCGATGTGCTCAACAACACGCCCGAGGAGGAAATCGATATTTCCGTGCCCGAGGGCATCTCCATTGACGATCCGGTGCGCATGTACCTCAAGGAAATCGGCAAAGTGCCGCTGCTTTCCGCCGAGGAGGAAATCGAGCTGGCCAAGCGCATGGAGCAGGGCGACGTGGCCGCCAAAAAGCGGCTCAGCGAGGCGAACCTGCGCCTGGTGGTCTCCATCGCCAAGCGCTATGTGGGGCGCGGCATGCTGTTTTTGGATTTGATCCAAGAGGGCAACATGGGCCTGATCAAGGCCGTGGAAAAATTCGATTACCGCAAGGGATACAAATTTTCCACCTACGCCACCTGGTGGATTCGCCAGGCGATCACCCGCGCCATTGCCGACCAGGCGCGCACCATCCGCATCCCCGTACACATGGTGGAAACCATCAACAAGCTGATTCGCGTTTCGCGCCAGCTCTTGCAGCAATATGGCCGCGAGCCGCAGCCTGAGGAAATCGCCGCGGAAATGGGCATTTCGGAGGACAAAGTGCGCGAGATCATGAAGATCGCGCAGGAGCCGGTCTCGCTGGAAACCCCGATTGGCGAGGAAGAGGACAGCCACCTGGGCGACTTCATCCCGGACGACGACGCCCCCGCCCCCGCCGAGGCCGCCGCGCGCACGCTGATGAAGGAGCAATTGCTCAACGCGCTCAAAACGCTCACCCCTCGCGAGGAGATGGTGCTCAAGCTGCGTTTCGGCCTGGAGGACGGCCGCCAGCGCACGCTGGAAGAGGTGGGCCGCGAATTCAAGGTCACGCGCGAGCGCATTCGCCAGATCGAGGCGAAGGCGCTGCGCAAGCTGCGCCACCCGAGCCGTTCGCGCAAGCTGAAGGAATCGCTGGATTGA
PROTEIN sequence
Length: 385
MGCSRNWIVFDRSKGVIHLSKLNAEAMQARVNELIETGKAKGVLTYNEIIETLGETEIVSEQFDKILDALSAIGVEVVKDEPIEEPEPEPDVLNNTPEEEIDISVPEGISIDDPVRMYLKEIGKVPLLSAEEEIELAKRMEQGDVAAKKRLSEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQQYGREPQPEEIAAEMGISEDKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDDAPAPAEAAARTLMKEQLLNALKTLTPREEMVLKLRFGLEDGRQRTLEEVGREFKVTRERIRQIEAKALRKLRHPSRSRKLKESLD*