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L3_105_000M1_scaffold_3449

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3449_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(220..1308)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XCJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93593.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
metallophosphoesterase
L3_105_000M1_scaffold_3449_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1305..2018)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IEP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE49788.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L3_105_000M1_scaffold_3449_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2055..2765)
DNA (711bp) protein (237aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGV2_9FIRM
NGG1p interacting factor 3 protein, NIF3
L3_105_000M1_scaffold_3449_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(2762..3427)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YE00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13421.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_105_000M1_scaffold_3449_5
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3427..4581)
DNA (1155bp) protein (385aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWP4_CLOCD
RNA polymerase, sigma 38 subunit, RpoS
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_105_000M1_scaffold_3449_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4550..6277)
DNA (1728bp) protein (576aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
DNA primase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IEP1_9FIRM
DNA primase
L3_105_000M1_scaffold_3449_7
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6616..7878)
DNA (1263bp) protein (421aa)
FAD dependent oxidoreductase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WBM5_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDD01546.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
FAD dependent oxidoreductase
L3_105_000M1_scaffold_3449_8
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7999..9522)
DNA (1524bp) protein (508aa)
family 1 extracellular solute-binding protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289F1C5
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ26787.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
family 1 extracellular solute-binding protein
L3_105_000M1_scaffold_3449_9
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9580..10476)
DNA (897bp) protein (299aa)
ABC transporter permease n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A0D99
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHQ60589.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
binding-protein-dependent transport systems inner membrane component
L3_105_000M1_scaffold_3449_10
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10493..11458)
DNA (966bp) protein (322aa)
ABC transporter, permease protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M9T0_9BACL
binding-protein-dependent transport systems inner membrane component
ABC transporter, permease protein {ECO:0000313|EMBL:EGG35881.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
L3_105_000M1_scaffold_3449_11
unknown

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comp(11589..11723)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 11 items

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