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L3_105_000M1_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_320_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..612)
DNA (612bp) protein (204aa)
Intein C-terminal splicing region n=3 Tax=root RepID=A5Z4P9_9FIRM
Intein C-terminal splicing region {ECO:0000313|EMBL:EDM51949.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Hedgehog/intein hint domain-containing protein
L3_105_000M1_scaffold_320_2
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(773..1249)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38149.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_320_3
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1345..1818)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R4Y4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38151.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_320_4
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1880..2101)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P4W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04761.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_105_000M1_scaffold_320_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2347..2694)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38873.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_320_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2727..2966)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QSM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38870.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_320_7
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3132..3392
DNA (261bp) protein (87aa)
transposase IS3 n=3 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B4C738
Uncharacterized protein {ECO:0000313|EMBL:EJZ69235.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
hypothetical protein
L3_105_000M1_scaffold_320_8
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3677..4294
DNA (618bp) protein (206aa)
transposase n=2 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B61F11
Integrase catalytic region {ECO:0000313|EMBL:CDC78140.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
integrase catalytic subunit
L3_105_000M1_scaffold_320_9
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4506..5363)
DNA (858bp) protein (286aa)
TIGR02452 family protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XEU9_9FIRM
TIGR02452 family protein {ECO:0000313|EMBL:ETO96423.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
hypothetical protein
L3_105_000M1_scaffold_320_10
unknown

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comp(5350..5679)
DNA (330bp) protein (110aa)

This feature has no annotations

L3_105_000M1_scaffold_320_11
unknown

Not on your lists

comp(5680..6627)
DNA (948bp) protein (316aa)

This feature has no annotations

L3_105_000M1_scaffold_320_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6641..7708)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B48646
Uncharacterized protein {ECO:0000313|EMBL:EDM64388.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_105_000M1_scaffold_320_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8018..8377)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R8D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39206.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_320_14
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9027..10064
DNA (1038bp) protein (346aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Clostridium sp. CAG:352 RepID=R6QN28_9CLOT
L3_105_000M1_scaffold_320_15
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11141..11896)
DNA (756bp) protein (252aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R9H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39601.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_320_16
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11880..13433)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QSN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39603.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
L3_105_000M1_scaffold_320_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14109..15500
DNA (1392bp) protein (464aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QRU7_9CLOT
L3_105_000M1_scaffold_320_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15516..16478
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R2B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39344.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_320_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16526..17548
DNA (1023bp) protein (341aa)
Cellulase M and related proteins (EC:3.2.1.4)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium sp. MSTE9 RepID=J0NAF5_9CLOT
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EJF41567.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_105_000M1_scaffold_320_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17548..18579
DNA (1032bp) protein (344aa)
Cellulase M and related proteins (EC:3.2.1.4)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QU07_9CLOT
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:CDC39350.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_320_21
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18563..19276
DNA (714bp) protein (238aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:352 RepID=R6RY77_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDC39352.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Predicted acetyltransferase
L3_105_000M1_scaffold_320_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19373..20656
DNA (1284bp) protein (428aa)
Pyridoxal phosphate-dependent enzyme methionine gamma-lyase family protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R2C8_9CLOT
Pyridoxal phosphate-dependent enzyme methionine gamma-lyase family protein {ECO:0000313|EMBL:CDC39354.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
aluminum resistance family protein
L3_105_000M1_scaffold_320_23
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20653..21474
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RY83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39357.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
abortive infection protein
L3_105_000M1_scaffold_320_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21493..21972
DNA (480bp) protein (160aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
tRNA-adenosine deaminase (EC:3.5.4.-)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridium sp. CAG:352 RepID=R6R2D3_9CLOT
L3_105_000M1_scaffold_320_25
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21985..22299
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R8U3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC39361.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_320_26
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22917..24365
DNA (1449bp) protein (483aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RY68_9CLOT
L3_105_000M1_scaffold_320_27
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24772..26451
DNA (1680bp) protein (560aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QRW8_9CLOT
L3_105_000M1_scaffold_320_28
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27102..29126)
DNA (2025bp) protein (675aa)
Putative translation elongation factor G n=1 Tax=Clostridium sp. CAG:352 RepID=R6QU23_9CLOT
Putative translation elongation factor G {ECO:0000313|EMBL:CDC39365.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_320_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29302..30414)
DNA (1113bp) protein (371aa)
Stage II sporulation protein D n=1 Tax=Clostridium sp. CAG:352 RepID=R6RY92_9CLOT
Stage II sporulation protein D {ECO:0000313|EMBL:CDC39367.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
stage II sporulation protein D
L3_105_000M1_scaffold_320_30
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30720..32090
DNA (1371bp) protein (457aa)
Citrate synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R2E5_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Citrate synthase
Displaying items 1-30 of 101 in total

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