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L3_105_000M1_scaffold_706

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_706_1
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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441..1673
DNA (1233bp) protein (411aa)
Site-specific recombinase XerD n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDI6_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK88258.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L3_105_000M1_scaffold_706_2
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1817..3028
DNA (1212bp) protein (404aa)
Site-specific recombinase XerD n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDI5_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK88257.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L3_105_000M1_scaffold_706_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3360..4415)
DNA (1056bp) protein (352aa)
Site-specific recombinase n=2 Tax=Clostridiales RepID=G2T0J6_ROSHA
site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:AEN95528.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_105_000M1_scaffold_706_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4473..4904)
DNA (432bp) protein (144aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:352 RepID=R6QNE6_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDC38138.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
transcriptional regulator
L3_105_000M1_scaffold_706_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5056..5292
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6R4X1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC38136.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5307..6302
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38134.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_706_7
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6561..8006
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AGS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81356.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
mobilization protein
L3_105_000M1_scaffold_706_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8219..8527
DNA (309bp) protein (103aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QTJ7_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC39185.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_9
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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8520..10184
DNA (1665bp) protein (555aa)
Type I restriction-modification system, M subunit n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B6X5_THEAS
type I restriction-modification system subunit M
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:ACZ19766.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 /; Su883) (Selenomonas acidaminovorans).;"
L3_105_000M1_scaffold_706_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10188..10991
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40862.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_706_11
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10984..12132
DNA (1149bp) protein (383aa)
HP0790-like protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD63_9CLOT
HP0790-like protein {ECO:0000313|EMBL:CDC40861.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
type I restriction system specificity protein
L3_105_000M1_scaffold_706_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12125..15256
DNA (3132bp) protein (1044aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJJ2_9CLOT
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EKY28111.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
HsdR family type I site-specific deoxyribonuclease
L3_105_000M1_scaffold_706_13
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15273..15512)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P720_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04857.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_105_000M1_scaffold_706_14
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15866..17677)
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Elongation factor 4 n=1 Tax=Clostridium sp. CAG:352 RepID=R6QNG5_9CLOT
lepA; GTP-binding protein lepA
L3_105_000M1_scaffold_706_15
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17821..19083
DNA (1263bp) protein (421aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYW9_9CLOT
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDC38169.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
iron-containing alcohol dehydrogenase
L3_105_000M1_scaffold_706_16
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19097..19750
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38170.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_706_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19804..20091
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R4Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38171.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20147..20581
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RUN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38172.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_706_19
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20683..21477
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QNG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38173.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
methyltransferase type 11
L3_105_000M1_scaffold_706_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21501..22016
DNA (516bp) protein (172aa)
Transposase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYX3_9CLOT
Transposase {ECO:0000313|EMBL:CDC38174.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
transposase
L3_105_000M1_scaffold_706_21
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21977..22609
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38175.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_706_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22588..22758)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R4Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38176.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_23
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22755..23303)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RUP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38177.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_706_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23711..23971
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QNH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38178.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_25
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24103..24636
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38179.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_26
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24716..25273
DNA (558bp) protein (186aa)
ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQT7_9CLOT
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDC38180.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_27
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25290..25712
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R501_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38181.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_28
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25716..26825
DNA (1110bp) protein (370aa)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RUP5_9CLOT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDC38182.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
oxygen-independent coproporphyrinogen III oxidase
L3_105_000M1_scaffold_706_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26906..27364
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38184.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_706_30
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27603..28064)
DNA (462bp) protein (154aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R505_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDC38186.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ribosomal-protein-alanine acetyltransferase
Displaying items 1-30 of 47 in total

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