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L3_105_000M1_scaffold_3410

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3410_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..156)
DNA (156bp) protein (52aa)
Transposase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z9T7_9FIRM
Transposase {ECO:0000313|EMBL:EDM50531.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_105_000M1_scaffold_3410_2
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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739..1278
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37214.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
putative secreted protein
L3_105_000M1_scaffold_3410_3
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1367..2245
DNA (879bp) protein (293aa)
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RS04_9CLOT
Pseudouridine synthase {ECO:0000313|EMBL:CDC37212.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_3410_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2346..4271)
DNA (1926bp) protein (642aa)
Glycosidases (EC:3.2.1.41)
Glycosidases n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW25_9CLOT
Glycosidases {ECO:0000313|EMBL:CDC37209.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_3410_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4358..4591
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R266_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37206.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_3410_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4486..5730)
DNA (1245bp) protein (415aa)
GTPase HflX n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW18_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
GTP-binding protein HflX
L3_105_000M1_scaffold_3410_7
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6081..7748
DNA (1668bp) protein (556aa)
Uncharacterized vancomycin resistance protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RRZ4_9CLOT
Uncharacterized vancomycin resistance protein {ECO:0000313|EMBL:CDC37202.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Uncharacterized vancomycin resistance protein
L3_105_000M1_scaffold_3410_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8566..9039
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:352 RepID=R6QKR1_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
greA; transcription elongation factor GreA
L3_105_000M1_scaffold_3410_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9127..11049
DNA (1923bp) protein (641aa)
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Lysine--tRNA ligase n=2 Tax=Ruminococcus RepID=D4L552_9FIRM
L3_105_000M1_scaffold_3410_10
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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11303..11842
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SVA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC59351.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
Displaying 10 items

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