ggKbase home page

L3_105_000M1_scaffold_232_15

Organism: dasL3_105_000M1_metabat_metabat_57_fa_fa

near complete RP 42 / 55 BSCG 48 / 51 MC: 2 ASCG 14 / 38
Location: 17318..20854

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1178.0
  • Bit_score: 2327
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 1179.0
  • Bit_score: 1900
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD38_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1178.0
  • Bit_score: 2327
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:352 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3537
ATGGAATTTAATGTATTTGAATCTATAAAGATTGGTCTTGCTTCACCCGAAAAGATAAGAGAATGGTCTTATGGCGAGGTTAAAAAACCTGAAACCATTAACTACCGTACTCTAAAGCCAGAACGCGATGGTCTTTTCTGCGAAACTATCTTTGGTCCGCAAAAAGACTGGGAATGCCACTGCGGTAAGTATAAGAAAATTCGCTTTAAAGGAAAAATCTGCGACCGTTGCGGTGTTGAAGTTACTCGTTCTAAGGTAAGAAGAGAGCGTATGGGACATATCGAGCTTGCTGCTCCTGTATCTCATATCTGGTATTTCAAGGGTATTCCATCAAGAATGGGGCTTATCCTTGATATATCACCAAGAACACTCGAAAAGGTTCTCTACTTTGCAATGTATATTGTTACTGATCCGGGCAATGTAAGAGAAATCGAGAAAAAGCAGTGCCTTACAGAAAAAGAGTATAGAGACCTTAAAGAAAAGTATGAAGACGATTTTGAGGCTATGATGGGTGCAGAAGCTATCAAAAAGCTTCTTGCAGAAATAGACCTCGACCAACTTTCTGATGAACTTAAGGAAGAACTCGAAAATGCTTCTGGTCAAAAGAGAGTAAGACTCCTCAAGAGAATTGAAGTTGTAGAATCTTTCCGTCTTTCAGGCAATAGACCTGAATGGATGATTCTCGATGTAATTCCTGTTATTCCTCCGGATATTCGTCCTATGGTTCAGCTTGATGGCGGACGCTTTGCAACATCTGACCTTAACGACCTTTATAGACGAGTTATCAACAGAAATAACAGACTTAGCAGACTTTTAGAGCTTAATGCTCCTGATATTATCATCAGAAATGAAAAGAGAATGCTTCAGGAAGCAGTTGACGCACTTATAGATAACGGCAGAAGAGGCAGACCAGTTACAGGCCCTAATAACAGAGCCTTGAAGTCACTTTCCGATATGCTTAAAGGTAAGCAGGGACGCTTCCGTCAGAATCTTCTCGGTAAGCGTGTTGACTACTCAGGTCGTTCGGTTATCGTTGTTGGACCTGAACTTAAAATGTATCAGTGCGGTCTTCCTAAGGAAATGGCTCTTGAGCTTTTTAAGCCTTTCGTTATGAAAATCCTTGTTGAAAATAATGCTGCCGGCAACATCAAGGCTGCTCGTAAGGCTGTTGAAAGAGCAAAGCCAGAGGTTTGGGACGCACTTGAAAAGGTTATCAAGGGACACCCGGTTCTTCTCAACCGTGCTCCTACACTTCATAGACTTGGTATTCAGGCATTCGAGCCTGTTCTCGTAGAGGGTAGAGCATTGAAACTCCACCCACTTGCTTGCACAGCATTTAACGCTGACTTCGACGGCGACCAGATGGCTGTCCATGTACCGCTTTCAGCAGAGGCTCAGGCAGAAGCAAGATTCCTCATGCTTGCTTCAAATAACCTCCTCAAGCCATCAGATGGACGACCAGTTACAGTTCCTACTCAGGATATGGTTCTTGGTTCATACTATCTTACACTTGATAAGGACGGCGAACCAGGCGAGGGAAAAATTTTCCGTGATTGCGATGAAGCTATTATGGCTTATGATGCAAAGGTTGTCAGCCTTCACGCTAAAATTAAAGTTAGAAGAACTCTCGAAATCAATGGCGTTATGAAGACAGGTCTTGTAGATACAACTGTTGGTAGAATCATCTTCAATAGACCTATTCCACAGGATTTGGGCTTTGTTGATAGAACTAACCCTGAAAATGACCTCAAGTTTGAGATTGACTTCCTTGTTGGCAAAAAGCAGCTTGGAAAAATCTTTGATAAGTGTATAAGAATCCATGGCACACAGAGAACATCTGAGGTTCTCGATGCTGTTAAAGCACAGGGCTATAAGTATTCTACAAAGAGTGCTATTACTGTTGCTGTTTGTGATGCTGAAATTCCACCAACAAAGAAAGATATTATCGCTCGTGCAGAAAAGCAGGTTGACCAGGTTACAAAGATGTATAAGCGAGGCTTTATGTCTAACCAAGAGCGTTACGAAAAGGTTCTTAAGGTTTGGGAAACTGCAACAAATGATGTTTCTGACGCACTTCAGGCTAACCTCGGCAGGTATAACCCAATCTTTATGATGGCTGACTCTGGTGCCCGTGGTTCTATGAGCCAGATTAGACAGCTTGCTGGTATGCGTGGACTTATTGCGAATACAGCAGGTAAGACAATAGAAATTCCTATCAGAGCTAACTATCGTGAAGGTCTTAACATTTTGGAATACTTTATTTCATCTCGTGGTGCGAGAAAGGGTCTTGCCGATACAGCTCTTAGAACGGCTGACTCAGGTTATCTTACCAGAAGACTTGTTGATGTTTCACAAGATGTTATCATCAGAGAGGACGACTGTGGTACTACTGAGGGTATCGAAGTATTCGAGATTAAAGAGGGTAAGGAATCTATCGAAAGCTTCCACGAAAGACTTCTCGGCAGATACCTTTGCGAAGATTTCAAAGACCCAGCAACAGGCGAGGTTCTTGTTTCTAAGGATAAGCTTATGGGTGATGATGAAGCAGACCTTATCGTCAGCAAGGGTGTTGAACGCATTAAGCTTCGTTCAATTCTCCATTGTCGTGCAAAGCACGGCGTCTGCAAGCGTTGCTATGGTGCTAACCTTGCAAACGGTCAGCCTGTTACAGTCGGTGAGGCTGTTGGTATTATTGCCGCTCAGTCTATCGGTGAGCCTGGTACACAGCTCACAATGAGAACCTTCCATACAGGTGGTGTCGCAGGAGCTGAAGATATTACACAGGGTCTTCCTCGTGTTGAAGAACTCTTTGAGGGCAGAAAGCCTAAGCATCTCGCTATCATCAGTGAAATTGCCGGTGTTGTCAAGTTCGAGGAAATCAAGAAGAACCGTCACGCTGTTATTTATAATGATGAAACAGGTGAACAGAGGTCTTACCTCATTCCATTCGGTTCAAGAGTTCGTGTTGAAGAAGGTCAGGTCATCGAGGCTGGTGAAATGATTACAGAGGGTTCTGTAAATCCACACGATGTTCTTGCAATTAAGGGTACAGAAGCTGTTCAGAACTACCTCATTCAGGAAGTTCAGAAAGCATATCGTATGCAGGGTGTTGATATCAACGATAAGCATATCGAAGTTATCATTCGTCAGATGATGAAGAAAGTCAGAATTGATGATAACGGCTCTACAAAGCTTCTCCCAACAACTCTTGTTGATAAGAGCGAGCTTTATGCTGCTAACGATGAGGTTCGTGCAAGAATTGCAAATGGTGAAGAGGGACTCACAGAGGCGACCTATACACCAATGCTTCTTGGTATCACAAAGGCTTCTCTTGCAACAGATTCCTTCCTTTCAGCCGCATCATTCCAGGAAACAACAAGAGTTCTTACAGATGCAGCTATCAAGGGTAAGGTTGACCCACTTATGGGCCTTAAAGAAAATGTTATTATCGGTAAGCTTGTTCCTGCTGGTACAGGTATGCACCGTTATAGAGATGTTGAATATAGAGAGGAAAATCCATCTAATTCAGCTGAATAA
PROTEIN sequence
Length: 1179
MEFNVFESIKIGLASPEKIREWSYGEVKKPETINYRTLKPERDGLFCETIFGPQKDWECHCGKYKKIRFKGKICDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDISPRTLEKVLYFAMYIVTDPGNVREIEKKQCLTEKEYRDLKEKYEDDFEAMMGAEAIKKLLAEIDLDQLSDELKEELENASGQKRVRLLKRIEVVESFRLSGNRPEWMILDVIPVIPPDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLSRLLELNAPDIIIRNEKRMLQEAVDALIDNGRRGRPVTGPNNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKILVENNAAGNIKAARKAVERAKPEVWDALEKVIKGHPVLLNRAPTLHRLGIQAFEPVLVEGRALKLHPLACTAFNADFDGDQMAVHVPLSAEAQAEARFLMLASNNLLKPSDGRPVTVPTQDMVLGSYYLTLDKDGEPGEGKIFRDCDEAIMAYDAKVVSLHAKIKVRRTLEINGVMKTGLVDTTVGRIIFNRPIPQDLGFVDRTNPENDLKFEIDFLVGKKQLGKIFDKCIRIHGTQRTSEVLDAVKAQGYKYSTKSAITVAVCDAEIPPTKKDIIARAEKQVDQVTKMYKRGFMSNQERYEKVLKVWETATNDVSDALQANLGRYNPIFMMADSGARGSMSQIRQLAGMRGLIANTAGKTIEIPIRANYREGLNILEYFISSRGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTEGIEVFEIKEGKESIESFHERLLGRYLCEDFKDPATGEVLVSKDKLMGDDEADLIVSKGVERIKLRSILHCRAKHGVCKRCYGANLANGQPVTVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGAEDITQGLPRVEELFEGRKPKHLAIISEIAGVVKFEEIKKNRHAVIYNDETGEQRSYLIPFGSRVRVEEGQVIEAGEMITEGSVNPHDVLAIKGTEAVQNYLIQEVQKAYRMQGVDINDKHIEVIIRQMMKKVRIDDNGSTKLLPTTLVDKSELYAANDEVRARIANGEEGLTEATYTPMLLGITKASLATDSFLSAASFQETTRVLTDAAIKGKVDPLMGLKENVIIGKLVPAGTGMHRYRDVEYREENPSNSAE*