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L3_105_000M1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_232_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(400..1782)
DNA (1383bp) protein (461aa)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6D8_9CLOT
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDC40849.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
putative penicillin-binding protein A
L3_105_000M1_scaffold_232_2
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1960..2229
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40848.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_3
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2324..2815
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2I7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40847.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2953..4047
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD48_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
GTP-binding protein YchF
L3_105_000M1_scaffold_232_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4094..5368
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40845.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_232_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5589..6287)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40844.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_7
unknown

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6556..6771
DNA (216bp) protein (72aa)

This feature has no annotations

L3_105_000M1_scaffold_232_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6859..8235
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
murC; UDP-N-acetylmuramate-L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW21_9CLOT
L3_105_000M1_scaffold_232_9
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8248..9135
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2I1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40842.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9318..9884
DNA (567bp) protein (189aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD43_9CLOT
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDC40841.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
sigma-70 family RNA polymerase sigma factor
L3_105_000M1_scaffold_232_11
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9874..10878
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40840.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11000..11596
DNA (597bp) protein (199aa)
metal dependent phosphohydrolase (EC:3.1.3.5)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6D4_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDC40839.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11809..13038
DNA (1230bp) protein (410aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW17_9CLOT
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CDC40838.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
cell envelope-related function transcriptional attenuator common domain
L3_105_000M1_scaffold_232_14
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13425..17297
DNA (3873bp) protein (1291aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2H7_9CLOT
L3_105_000M1_scaffold_232_15
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17318..20854
DNA (3537bp) protein (1179aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD38_9CLOT
L3_105_000M1_scaffold_232_16
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20914..21495)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40835.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_232_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22165..23892
DNA (1728bp) protein (576aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6D2_9CLOT
Phosphomannomutase {ECO:0000313|EMBL:CDC40834.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23984..25249
DNA (1266bp) protein (422aa)
ATPase AAA family n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW13_9CLOT
ATPase AAA family {ECO:0000313|EMBL:CDC40833.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Recombination protein MgsA
L3_105_000M1_scaffold_232_19
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25718..26179
DNA (462bp) protein (154aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteinase LuxS n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2H3_9CLOT
L3_105_000M1_scaffold_232_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26432..27736
DNA (1305bp) protein (435aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD32_9CLOT
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CDC40831.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_21
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28006..31770
DNA (3765bp) protein (1255aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYE1_9CLOT
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CDC40830.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31906..33429)
DNA (1524bp) protein (508aa)
Mg chelatase-like protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6D0_9CLOT
Mg chelatase-like protein {ECO:0000313|EMBL:CDC40829.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
yifB; putative protein YifB
L3_105_000M1_scaffold_232_23
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33701..34279
DNA (579bp) protein (193aa)
Putative RNA polymerase sigma-H factor n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW07_9CLOT
Putative RNA polymerase sigma-H factor {ECO:0000313|EMBL:CDC40828.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
sigH; RNA polymerase sigma-H factor
L3_105_000M1_scaffold_232_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34395..34670
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40827.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_232_25
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34826..35320
DNA (495bp) protein (165aa)
RNA-binding S4 domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD28_9CLOT
RNA-binding S4 domain protein {ECO:0000313|EMBL:CDC40826.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
RNA-binding S4 domain-containing protein
L3_105_000M1_scaffold_232_26
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35353..35586
DNA (234bp) protein (78aa)
S4 domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYD7_9CLOT
S4 domain protein {ECO:0000313|EMBL:CDC40825.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
S4 domain protein
L3_105_000M1_scaffold_232_27
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35655..36506)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40824.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_105_000M1_scaffold_232_28
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36604..37554)
DNA (951bp) protein (317aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Transcriptional regulator/sugar kinase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QW03_9CLOT
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CDC40823.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_105_000M1_scaffold_232_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37719..38465)
DNA (747bp) protein (249aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2G4_9CLOT
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDC40822.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
D-alanyl-D-alanine carboxypeptidase
L3_105_000M1_scaffold_232_30
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38698..39969
DNA (1272bp) protein (424aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RD23_9CLOT
Displaying items 1-30 of 79 in total

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