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L3_105_000M1_scaffold_833_2

Organism: dasL3_105_000M1_metabat_metabat_57_fa_fa

near complete RP 42 / 55 BSCG 48 / 51 MC: 2 ASCG 14 / 38
Location: 1217..4678

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 1153.0
  • Bit_score: 2285
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 1151.0
  • Bit_score: 1392
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6G6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 1153.0
  • Bit_score: 2285
  • Evalue 0.0

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Taxonomy

Clostridium sp. CAG:352 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3462
ATGAAATTTTTAGATAACATATTTTATAAAATTCCAGAATACAGAGAGCTTTCAAGAGCTACCGACTTATCCCGTCTGCCTGCTTGCGTGACGGGACTTTCGACTGTCCATAAATCTCACCTTATATATTCTCTTTGTCGTGAAAAACAAGCCCCCGCTCTTGTAATTGCCGCTGATGAGCAAGAGGCTCAAAGCTTTTGTGCGGATATTTCCGCTATGGGACTTAAAGCACTTTATTATCCCGCAAGAGATTTCATTTTCTATGATATGGCTGGACGCTCACACGAATACGAACATCAACGCATACACGCCCTTTTTGCCTTGCAAAATAAGCTATGTGATGTAGTAGTCGCTTGCATTGACGGTTTATTGCAATATACAATTCCAAGTAAAATCCTTAGAACTGCGACTATATCCGCACATATCGGCGATGAAATACCGCTCGATAAAATCGTACTTTCACTTGTAAATGCAGGCTACGAACGCACCGAGCAGGTTGAGGGAACCGGACAATTCGCCGTCCGAGGTGGTATTCTTGATTTCTTTCTTACAACAGAAACAAGACCTATGCGTGTAGAATTCTGGGGAGATGAAATCGACAATATTTCCTATTTCGACCCCGAAACCCAAAGAAGAACAACCGAAACCTGCGATTCATTCATAATCACCCCATCAACGGAAATTCTTATCAACGATAAAGAAAAGCTTATAGAAGCAATTACCAAAAAAGCCACTTCACTTCGTGGCAAAACTTCCGCAATAGCAAAGGAAAAGCTTTTAAACGAATGTGACATTCTCAGAGATACGGGCAATCTTCCTTGCGTTGACAAGTTCTATTCGCTGATTTATCCTAAGAGCGAAACATTATTCGATTATATAGATAATGATATGCTTGTTTTTGTTTCAGAACAAGTCAATCTTCGTGAACGAATGAAATCCGTTATGTGGCAGTGGCACGAGGATATTAAAGACTACTTTTCAGACGGAACTCTCTGCAAAGGACTCGATACATTCTCGCTTGATTATCAAGATTACCTCGATAATGTTCAGCACCGTAATACTATTCTTTTAGACAATTTTGCAAGAGGAACTTCCGATTTAACACTCCGAGAACTTTTCAATATGAGCGTCAAGCGTCTTTCCATATGGAGTGGTTCTGTTTCAATACTTTGTGACGATTTAGATGCTATGCTTGCTCAGGGATATACAGTTGTCGTACTATGTGGAACAGAAAAAGCCGCCAAAAATCTCTGCGATGATTTAAAGACCCACGATAAAAATGCCATTTTTATTGCAAATGATTCTCCTCTCGGAGAAAATAAGCTTTATGTTGCAGCTGGCAGTCTTTCGGCTGGCTTTGAATATCCTGCGGCTAAATTTGCTCTGATAACACATGGTCAAGTCAGCATAGCAACAAAAAAACGCCGTAAAAAGCATACAAACGGTCAAAGAATTTCAAGCATTACCGACCTTTCAATCGGTGACTATGTAGTTCATTCCATACACGGAATAGGCATTTTTGACGGCATACACAAGATAGAAACCCAAGGCGTAACCAAAGATTACATCAAGATAAAATACGCAAAACAAGATGTTCTCTATGTTCCCGTAACACAGCTCGACCTTGTCGCAAAATATATCGGCCCTCGTGAGGATAGCACTGTCAAACTCCATAAGCTTGGCGGTACAGAGTGGCAAAAGACCAAAACAAAAGTACGCACAGCCGTTAAAGATATTGCCCACGAGCTTATAAAGCTTTATAGCGAGCGTATGAAAGCACAAGGTCACGCTTTTCCAAAGGATACCGAATGGCAAAAGGATTTCGAGGCTCGTTTTGAATACGAAGAAACTCCCGACCAGCTCCGTTGCATTGAAGAAATCAAAGAGGATATGGAGCGAACCGTTCCTATGGAAAGACTGCTCTGCGGAGATGTTGGTTTCGGCAAAACAGAAGTTGCACTTCGTGCCGCCTTTAAATGCGTAACCGACTCAAAACAGTGTGCCTTACTTGTCCCTACAACAATTCTTGCATGGCAACATTATCAGACAATCCTCCGCAGATTTGAAGGTTTTCCCGTAAATATAGAATTACTTTCAAGATTCCGAACCGCCAAAGAGCAGAAAGAAATCATTAAAAAGCTCAAAAACGGTGATATTGATATAATTGTCGGCACTCACCGACTTCTCGGCAAGGATATTGAGTTCCGAGATTTAGGCTTAGTCATAATTGACGAGGAACAGCGTTTTGGCGTCGCTCAAAAGGAAAAATTCAAGGAAATGCGTAAGAATATTGATGTTCTCACACTTTCCGCTACACCTATTCCAAGAACACTTAATATGGCTATGTCGGGTATTCGTGATATGTCCGTTTTAGAGGAAGCCCCACAAGACAGACACCCTGTTCAGACCTATGTCCTCGAACAAGATAACGGTGTTATAAACGAGGCAATTCGCCGAGAATTACGCAGAGGCGGTCAGGTATTCGTACTTCATAATTCCGTTGAAACTATATCGCAAAGAGCCGCCAAGATTCAGCTTGATATTCCCGAAGCAAAGGTCGGCTTTGGACATGGCAAAATGAACGAAAACGAGCTTTCCGAAATCTGGCGAAAAATGCTCGAAGGCGAAATAAATGTCCTTGTCTGCACAACGATTATCGAAACAGGCGTTGACCTGCCTAACGCCAATACTCTCATAATTGAAAATGCCGATAGAATGGGACTTTCCCAGCTACACCAGATTCGTGGACGAGTTGGCAGAAGTTCTCGCCGAGCTTATGCCTACCTCACCTTTACAAGAAACAAAGTCCTAAGCGAAATCGCCCAAAAGCGACTTTCAGCTATTCGTGAATTTACAGAATTTGGTTCAGGCTTCAAGATTGCTATGCGTGACCTCGAACTCCGAGGAGCAGGAAATATCCTCGGTGCTCAACAGCACGGTCATATGGAAGATGTCGGATACGATATGTATTTAAGATTGCTTGGTGACGCTGTCAGTGAAGAAAAGGGCGAAGAAAATCCCGACAGAGATATTGACTGCCTTGTTGATATACACATTGAGGCACACATTCCAGAAGACTATATCGAAAATCTCAACCATAGACTTGAAATTTACCGCAGAATTTCCGAAATCCGCACAGAAGAAGATTTAAGCGATGTTACAGATGAATTGATAGACCGTTTCGGCGACCCGCCTAAATCCGTACTCGGACTTCTCACGATTGCACTTGTCAGAAGTAAGGCAGAGGGTTCAGGAATTTATGAGATTAAACAGCGTGATGGCTATGCTATGATGTTTGTAAGAAATATAAAGACGCCTGCGGTTGCAGATATTATAAGTCGAATGAAGAGCAGAGCAACCCTTAGTGCGACAAATAAACCATATATAGCTATTAAAATGCAGCCAAATGAAAAGATTTTGGATTTATTATGCACAACCTTAGATATTAAGGGAATAGGATAA
PROTEIN sequence
Length: 1154
MKFLDNIFYKIPEYRELSRATDLSRLPACVTGLSTVHKSHLIYSLCREKQAPALVIAADEQEAQSFCADISAMGLKALYYPARDFIFYDMAGRSHEYEHQRIHALFALQNKLCDVVVACIDGLLQYTIPSKILRTATISAHIGDEIPLDKIVLSLVNAGYERTEQVEGTGQFAVRGGILDFFLTTETRPMRVEFWGDEIDNISYFDPETQRRTTETCDSFIITPSTEILINDKEKLIEAITKKATSLRGKTSAIAKEKLLNECDILRDTGNLPCVDKFYSLIYPKSETLFDYIDNDMLVFVSEQVNLRERMKSVMWQWHEDIKDYFSDGTLCKGLDTFSLDYQDYLDNVQHRNTILLDNFARGTSDLTLRELFNMSVKRLSIWSGSVSILCDDLDAMLAQGYTVVVLCGTEKAAKNLCDDLKTHDKNAIFIANDSPLGENKLYVAAGSLSAGFEYPAAKFALITHGQVSIATKKRRKKHTNGQRISSITDLSIGDYVVHSIHGIGIFDGIHKIETQGVTKDYIKIKYAKQDVLYVPVTQLDLVAKYIGPREDSTVKLHKLGGTEWQKTKTKVRTAVKDIAHELIKLYSERMKAQGHAFPKDTEWQKDFEARFEYEETPDQLRCIEEIKEDMERTVPMERLLCGDVGFGKTEVALRAAFKCVTDSKQCALLVPTTILAWQHYQTILRRFEGFPVNIELLSRFRTAKEQKEIIKKLKNGDIDIIVGTHRLLGKDIEFRDLGLVIIDEEQRFGVAQKEKFKEMRKNIDVLTLSATPIPRTLNMAMSGIRDMSVLEEAPQDRHPVQTYVLEQDNGVINEAIRRELRRGGQVFVLHNSVETISQRAAKIQLDIPEAKVGFGHGKMNENELSEIWRKMLEGEINVLVCTTIIETGVDLPNANTLIIENADRMGLSQLHQIRGRVGRSSRRAYAYLTFTRNKVLSEIAQKRLSAIREFTEFGSGFKIAMRDLELRGAGNILGAQQHGHMEDVGYDMYLRLLGDAVSEEKGEENPDRDIDCLVDIHIEAHIPEDYIENLNHRLEIYRRISEIRTEEDLSDVTDELIDRFGDPPKSVLGLLTIALVRSKAEGSGIYEIKQRDGYAMMFVRNIKTPAVADIISRMKSRATLSATNKPYIAIKMQPNEKILDLLCTTLDIKGIG*