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L3_105_000M1_scaffold_1151

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1151_1
unknown

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3..107
DNA (105bp) protein (35aa)

This feature has no annotations

L3_105_000M1_scaffold_1151_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(92..244)
DNA (153bp) protein (51aa)
Transposase IS21 family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6M0_9CLOT
Transposase IS21 family {ECO:0000313|EMBL:CCX51245.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1151_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(614..1870)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35546.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_105_000M1_scaffold_1151_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2049..2921)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49536.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1151_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3018..4919)
DNA (1902bp) protein (634aa)
Putative lipoprotein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9L4_9CLOT
Putative lipoprotein {ECO:0000313|EMBL:CCX49537.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
membrane protein insertase YidC
L3_105_000M1_scaffold_1151_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5029..5685)
DNA (657bp) protein (219aa)
TM2 domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2R7_9CLOT
TM2 domain protein {ECO:0000313|EMBL:CCX49538.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
TM2 domain.
L3_105_000M1_scaffold_1151_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5742..6071)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49539.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1151_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6113..6883)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49540.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1151_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6901..7317)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49541.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1151_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7362..8450)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9L7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49542.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1151_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8542..9033)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2R9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49543.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1151_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..9432)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5U0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49544.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein predicted by Glimmer/Critica
L3_105_000M1_scaffold_1151_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9661..11298
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1Y8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49545.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1151_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11314..12282
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49546.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1151_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12263..12889
DNA (627bp) protein (209aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2S3_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX49548.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_105_000M1_scaffold_1151_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13105..13569)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI0003625335
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00839.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_105_000M1_scaffold_1151_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13804..15093
DNA (1290bp) protein (430aa)
ATPase (AAA+ superfamily)-like protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5U4_9CLOT
ATPase (AAA+ superfamily)-like protein {ECO:0000313|EMBL:CCX49549.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATPase (AAA+ superfamily)-like protein
L3_105_000M1_scaffold_1151_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15264..16064)
DNA (801bp) protein (267aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1Z2_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CCX49550.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1151_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16573..17616)
DNA (1044bp) protein (348aa)
Cell shape determining protein MreB/Mrl family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9M4_9CLOT
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CCX49552.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
MreB/Mrl family cell shape determining protein
L3_105_000M1_scaffold_1151_20
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17833..18666
DNA (834bp) protein (278aa)
Sortase B n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EN19_CLOPA
NPQTN specific sortase B {ECO:0000313|EMBL:GAE34161.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139).;"
sortase, SrtB family
L3_105_000M1_scaffold_1151_21
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18675..19508)
DNA (834bp) protein (278aa)
rsmA; Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HFZ8_9FIRM
Tax=BJP_IG2157_Clostridiales_52_13
L3_105_000M1_scaffold_1151_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19505..20686)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50172.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
3D domain protein
L3_105_000M1_scaffold_1151_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20765..22918
DNA (2154bp) protein (718aa)
Penicillin-binding protein transpeptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFF7_9CLOT
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:CCX50171.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
penicillin-binding protein transpeptidase
L3_105_000M1_scaffold_1151_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22991..23827
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3L3_9CLOT
L3_105_000M1_scaffold_1151_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23829..25133
DNA (1305bp) protein (435aa)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7E7_9CLOT
Pseudouridine synthase {ECO:0000313|EMBL:CCX50169.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
23S RNA-specific pseudouridylate synthase
L3_105_000M1_scaffold_1151_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25134..25259
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4F5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50168.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1151_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25198..25452
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50167.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
YcfA-like protein.
L3_105_000M1_scaffold_1151_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25439..25801
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50166.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1151_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25931..27148
DNA (1218bp) protein (406aa)
AAA+ superfamily ATPase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3K8_9CLOT
AAA+ superfamily ATPase {ECO:0000313|EMBL:CCX50165.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Predicted ATPase (AAA+ superfamily)
L3_105_000M1_scaffold_1151_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27160..27822
DNA (663bp) protein (221aa)
L-serine dehydratase iron-sulfur-dependent beta subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7E3_9CLOT
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CCX50164.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L-serine dehydratase, iron-sulfur-dependent subunit beta
Displaying items 1-30 of 33 in total

View Taxonomy