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L3_105_000M1_scaffold_1231

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1231_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(473..2566)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9X3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49667.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
beta-lactamase inhibitory protein II
L3_105_000M1_scaffold_1231_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2785..3741
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B316_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49668.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1231_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3779..5752
DNA (1974bp) protein (658aa)
Phosphoesterase RecJ domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3B1_9CLOT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:CCX49778.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
phosphoesterase RecJ domain-containing protein
L3_105_000M1_scaffold_1231_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5786..6244
DNA (459bp) protein (153aa)
50S ribosomal protein L9 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6D6_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
LSU ribosomal protein L9P
L3_105_000M1_scaffold_1231_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6287..7645
DNA (1359bp) protein (453aa)
Replicative DNA helicase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2H1_9CLOT
Replicative DNA helicase {ECO:0000313|EMBL:CCX49780.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DNA helicase
L3_105_000M1_scaffold_1231_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7706..8329
DNA (624bp) protein (208aa)
chloramphenicol O-acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BED2_9CLOT
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:CCX49781.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1231_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8892..10370)
DNA (1479bp) protein (493aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9U7_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CCX49642.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ypnP1; multidrug resistance protein YpnP
L3_105_000M1_scaffold_1231_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(10462..11079)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F3P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03561.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L-lysine permease
L3_105_000M1_scaffold_1231_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11289..12602
DNA (1314bp) protein (438aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5B255_9CLOT
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CCX49645.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
RNA polymerase sigma 54 subunit RpoN
L3_105_000M1_scaffold_1231_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12599..14560
DNA (1962bp) protein (654aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDZ3_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCX49646.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative sigma54 specific transcriptional regulator
L3_105_000M1_scaffold_1231_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14832..16775
DNA (1944bp) protein (648aa)
Oligopeptide-binding protein AliB n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9V2_9CLOT
Oligopeptide-binding protein AliB {ECO:0000313|EMBL:CCX49647.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type transporter, periplasmic subunit
L3_105_000M1_scaffold_1231_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16874..17818
DNA (945bp) protein (315aa)
ABC-type transporter integral membrane subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B300_9CLOT
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CCX49648.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type transporter, integral membrane subunit
L3_105_000M1_scaffold_1231_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17818..18798
DNA (981bp) protein (327aa)
Oligopeptide transport system permease protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B628_9CLOT
Oligopeptide transport system permease protein {ECO:0000313|EMBL:CCX49649.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type transporter, integral membrane subunit
L3_105_000M1_scaffold_1231_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18812..19870
DNA (1059bp) protein (353aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Clostridium sp. CAG:226 RepID=R5B259_9CLOT
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CCX49650.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptide ABC transporter ATP-binding protein
L3_105_000M1_scaffold_1231_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19863..20801
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49651.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_105_000M1_scaffold_1231_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20804..22279
DNA (1476bp) protein (492aa)
Probable cytosol aminopeptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B304_9CLOT
Probable cytosol aminopeptidase {ECO:0000313|EMBL:CCX49653.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1231_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22293..22994
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B632_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49654.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1231_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23091..23807)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B263_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49655.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative phage protein
L3_105_000M1_scaffold_1231_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24023..24763
DNA (741bp) protein (247aa)
Bile acid 7-dehydroxylase 1/3 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9W8_9CLOT
Bile acid 7-dehydroxylase 1/3 {ECO:0000313|EMBL:CCX49662.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
7-alpha-hydroxysteroid dehydrogenase
L3_105_000M1_scaffold_1231_20
unknown

Not on your lists

comp(24821..25063)
DNA (243bp) protein (81aa)

This feature has no annotations

L3_105_000M1_scaffold_1231_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25160..25492
DNA (333bp) protein (111aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B313_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX49663.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
helix-turn-helix domain-containing protein
L3_105_000M1_scaffold_1231_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25626..27461
DNA (1836bp) protein (612aa)
VanW-like protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B640_9CLOT
VanW-like protein {ECO:0000313|EMBL:CCX49664.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
vanW-like family protein
L3_105_000M1_scaffold_1231_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27556..28866
DNA (1311bp) protein (437aa)
BH1805 protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B271_9CLOT
BH1805 protein {ECO:0000313|EMBL:CCX49665.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1231_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29206..29370
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2CCR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67052.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000M1_scaffold_1231_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29411..29602)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CI73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67051.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_000M1_scaffold_1231_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30077..30196)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B495_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67050.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying 26 items

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