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L3_105_000M1_scaffold_1752

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1752_1
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(152..2566)
DNA (2415bp) protein (805aa)
Antirepressor regulating drug resistance protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IU01_DESMD
antirepressor regulating drug resistance protein
Tax=BJP_IG2157_Clostridiales_52_13
L3_105_000M1_scaffold_1752_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2563..2970)
DNA (408bp) protein (136aa)
Transcriptional repressor CopY family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3X9_9CLOT
Transcriptional repressor CopY family {ECO:0000313|EMBL:CCX49983.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1752_3
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3192..3680
DNA (489bp) protein (163aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FVU2_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EMS72683.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
RNA polymerase sigma factor
L3_105_000M1_scaffold_1752_4
unknown

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3670..4920
DNA (1251bp) protein (417aa)

This feature has no annotations

L3_105_000M1_scaffold_1752_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4917..6437)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49982.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1752_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6448..7986)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49981.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1752_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7997..9463)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49982.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1752_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9474..10907)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49982.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1752_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10918..12267)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B324_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49980.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1752_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12352..13752)
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Sensor histidine kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6X6_9CLOT
sensor histidine kinase
L3_105_000M1_scaffold_1752_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13757..14407)
DNA (651bp) protein (217aa)
Two-component response regulator n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3X3_9CLOT
Two-component response regulator {ECO:0000313|EMBL:CCX49978.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
two-component response regulator
L3_105_000M1_scaffold_1752_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14512..16056)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49977.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1752_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16059..17546)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49977.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1752_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17549..19066)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49797.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1752_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19154..19303)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49976.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1752_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19284..20687)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B318_9CLOT
histidine kinase
L3_105_000M1_scaffold_1752_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20691..21353)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6X1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49974.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_105_000M1_scaffold_1752_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21727..22155)
DNA (429bp) protein (143aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Signal transduction histidine kinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTJ9_9FIRM
Signal transduction histidine kinase
Displaying 18 items

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