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L3_105_000M1_scaffold_1753

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1753_1
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(187..1251)
DNA (1065bp) protein (355aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Clostridium sp. CAG:138 RepID=R6BCF5_9CLOT
L3_105_000M1_scaffold_1753_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1248..1943)
DNA (696bp) protein (232aa)
Integral membrane protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDV2_9CLOT
Integral membrane protein {ECO:0000313|EMBL:CCX49596.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
integral membrane protein TIGR01906
L3_105_000M1_scaffold_1753_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1940..2680)
DNA (741bp) protein (247aa)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B221_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CCX49595.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
NUDIX hydrolase
L3_105_000M1_scaffold_1753_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2802..3482
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2V4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49593.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1753_5
unknown

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comp(4127..6136)
DNA (2010bp) protein (670aa)

This feature has no annotations

L3_105_000M1_scaffold_1753_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6609..8105)
DNA (1497bp) protein (499aa)
Phosphoglucomutase/phosphomannomutase family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6D3_9CLOT
Phosphoglucomutase/phosphomannomutase family protein {ECO:0000313|EMBL:CCX50853.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative phosphoglucomutases
L3_105_000M1_scaffold_1753_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8158..8832)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50852.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_1753_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8839..9825)
DNA (987bp) protein (329aa)
Putative ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHC4_9CLOT
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCX50851.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative ABC transporter permease protein
L3_105_000M1_scaffold_1753_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9822..10931)
DNA (1110bp) protein (370aa)
Putative ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5K3_9CLOT
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCX50850.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative ABC transporter permease protein
L3_105_000M1_scaffold_1753_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10924..12465)
DNA (1542bp) protein (514aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9A4_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX50849.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter ATP-binding protein
L3_105_000M1_scaffold_1753_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12603..13841)
DNA (1239bp) protein (413aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6C8_9CLOT
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCX50848.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative ABC transporter substrate-binding protein
L3_105_000M1_scaffold_1753_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13934..15163)
DNA (1230bp) protein (410aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Threonine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDB7_9CLOT
threonine synthase
L3_105_000M1_scaffold_1753_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15351..16580
DNA (1230bp) protein (410aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHB8_9CLOT
L3_105_000M1_scaffold_1753_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16843..17139)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51208.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_1753_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17448..19148)
DNA (1701bp) protein (567aa)
NLP/P60 protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BED0_9CLOT
NLP/P60 protein {ECO:0000313|EMBL:CCX51207.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative peptidoglycan-binding domain-containing protein
L3_105_000M1_scaffold_1753_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19344..20225
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BID0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51206.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
conserved hypothetical protein
L3_105_000M1_scaffold_1753_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20251..21027
DNA (777bp) protein (259aa)
UPF0271 protein BN545_00626 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6J0_9CLOT
UPF0271 protein BN545_00626 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
LamB/YcsF family protein
L3_105_000M1_scaffold_1753_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21029..21730
DNA (702bp) protein (234aa)
Putative regulatory protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAA5_9CLOT
Putative regulatory protein {ECO:0000313|EMBL:CCX51204.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative regulatory protein
L3_105_000M1_scaffold_1753_19
unknown

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21727..21894
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 19 items

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