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L3_105_000M1_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 244 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_258_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BT06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75375.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_000M1_scaffold_258_2
unknown

Not on your lists

comp(82..345)
DNA (264bp) protein (88aa)

This feature has no annotations

L3_105_000M1_scaffold_258_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(465..881)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50109.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_258_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1071..1898
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4A4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50108.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_258_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1900..2190
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50107.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_258_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2205..2717)
DNA (513bp) protein (171aa)
Transcription antiterminator n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFA5_9CLOT
Transcription antiterminator {ECO:0000313|EMBL:CCX50106.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
transcription antiterminator
L3_105_000M1_scaffold_258_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2749..3012)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50105.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pyrroloquinoline quinone biosynthesis protein
L3_105_000M1_scaffold_258_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3009..4121)
DNA (1113bp) protein (371aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7A5_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CCX50104.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Predicted Fe-S oxidoreductases
L3_105_000M1_scaffold_258_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4123..4959)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4A1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50103.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_258_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4949..5683)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50102.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_258_11
unknown

Not on your lists

comp(5753..5989)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AYZ6_9FIRM
L3_105_000M1_scaffold_258_12
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6007..11469)
DNA (5463bp) protein (1821aa)
Glycosyl hydrolase family 20 catalytic domain protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EWV9_9FIRM
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDE05947.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
beta-N-acetylhexosaminidase
L3_105_000M1_scaffold_258_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11722..13374)
DNA (1653bp) protein (551aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATPase histidine kinase-DNA gyrase B-and HSP90-like domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1K3_9CLOT
phoR; phosphate regulon sensor protein phoR
L3_105_000M1_scaffold_258_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13371..14051)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDD5_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX49431.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DNA-binding response regulator
L3_105_000M1_scaffold_258_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14057..14701)
DNA (645bp) protein (215aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium sp. CAG:226 RepID=R5B987_9CLOT
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
phosphate uptake regulator PhoU
L3_105_000M1_scaffold_258_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14701..15492)
DNA (792bp) protein (264aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pstB; phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2E2_9CLOT
L3_105_000M1_scaffold_258_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15498..16358)
DNA (861bp) protein (287aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5F3_9CLOT
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:CCX49434.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pstA; phosphate ABC transporter permease protein
L3_105_000M1_scaffold_258_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16363..17250)
DNA (888bp) protein (296aa)
Phosphate ABC transporter permease protein PstC n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1K9_9CLOT
Phosphate ABC transporter permease protein PstC {ECO:0000313|EMBL:CCX49435.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pstC; phosphate ABC transporter permease protein
L3_105_000M1_scaffold_258_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17328..18143)
DNA (816bp) protein (272aa)
Phosphate binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDE0_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:CCX49436.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pstS; phosphate ABC transporter phosphate-binding protein
L3_105_000M1_scaffold_258_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18341..19183
DNA (843bp) protein (281aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B993_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CCX49437.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
AAA ATPase
L3_105_000M1_scaffold_258_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19189..19839
DNA (651bp) protein (217aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2E6_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCX49438.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_258_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19906..21027)
DNA (1122bp) protein (374aa)
methylmalonyl-CoA mutase metallochaperone MeaB (EC:2.7.-.-)
LAO/AO transport system ATPase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5G0_9CLOT
LAO/AO transport system ATPase {ECO:0000313|EMBL:CCX49439.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_258_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21030..23219)
DNA (2190bp) protein (730aa)
methylmalonyl-CoA mutase C-terminal domain/methylmalonyl-CoA mutase N-terminal domain (EC:5.4.99.2)
Methylmalonyl-CoA mutase (MCM) n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1L5_9CLOT
Methylmalonyl-CoA mutase (MCM) {ECO:0000313|EMBL:CCX49440.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_258_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23221..25119)
DNA (1899bp) protein (633aa)
methylmalonyl-CoA mutase N-terminal domain (EC:5.4.99.2)
Methylmalonyl-CoA mutase large subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDE7_9CLOT
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:CCX49441.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_258_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25141..26667)
DNA (1527bp) protein (509aa)
Acetyl-CoA carboxylase alpha subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B998_9CLOT
Acetyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:CCX49442.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
AccA; acetyl-CoA carboxylase subunit alpha
L3_105_000M1_scaffold_258_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26706..27107)
DNA (402bp) protein (134aa)
Methylmalonyl-CoA epimerase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2F1_9CLOT
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:CCX49443.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
methylmalonyl-CoA epimerase
L3_105_000M1_scaffold_258_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27231..27764)
DNA (534bp) protein (178aa)
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases gamma subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5G6_9CLOT
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases gamma subunit {ECO:0000313|EMBL:CCX49444.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_258_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27764..28567)
DNA (804bp) protein (268aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase beta subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B1M1_9CLOT
2-oxoglutarate ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CCX49445.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_258_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28564..29703)
DNA (1140bp) protein (380aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDF1_9CLOT
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:CCX49446.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
L3_105_000M1_scaffold_258_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29700..29900)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9A5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49447.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
4Fe-4S ferredoxin
Displaying items 1-30 of 244 in total

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