ggKbase home page

L3_105_000M1_scaffold_318

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_318_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

490..1530
DNA (1041bp) protein (347aa)
L-aminopeptidase/D-esterase (EC:3.4.11.19)
Peptidase family T4 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4H0_9CLOT
Peptidase family T4 {ECO:0000313|EMBL:CCX50183.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_318_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1696..2526
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50184.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cell wall-associated hydrolase
L3_105_000M1_scaffold_318_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2539..3936
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3M7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50185.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_318_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3960..5231
DNA (1272bp) protein (424aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFG8_9CLOT
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCX50186.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_318_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5234..6205
DNA (972bp) protein (324aa)
Putative pyridoxal-phosphate-dependent enzyme n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBG4_9CLOT
Putative pyridoxal-phosphate-dependent enzyme {ECO:0000313|EMBL:CCX50187.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative pyridoxal-phosphate-dependent enzyme
L3_105_000M1_scaffold_318_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6215..6931
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50188.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
aspartate racemase
L3_105_000M1_scaffold_318_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7526..9043)
DNA (1518bp) protein (506aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7G1_9CLOT
ABC transporter related {ECO:0000313|EMBL:CCX50189.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter
L3_105_000M1_scaffold_318_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9314..9790)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5I7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49464.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_318_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9799..10680)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49463.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_318_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11891..12961
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50822.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ssuC2; aliphatic sulfonates ABC transporter permease SsuC
L3_105_000M1_scaffold_318_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12958..13737
DNA (780bp) protein (260aa)
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6A6_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component {ECO:0000313|EMBL:CCX50823.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L3_105_000M1_scaffold_318_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13802..15013
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B981_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50824.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ssuA2; aliphatic sulfonates ABC transporter substrate-binding protein SsuA
L3_105_000M1_scaffold_318_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15133..15768
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5I0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50825.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_318_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15967..16347)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BH94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50826.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_318_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16486..18222)
DNA (1737bp) protein (579aa)
NAD(P)-dependent iron-only hydrogenase catalytic subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD93_9CLOT
NAD(P)-dependent iron-only hydrogenase catalytic subunit {ECO:0000313|EMBL:CCX50827.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
NAD(P)-dependent iron-only hydrogenase catalytic subunit
L3_105_000M1_scaffold_318_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18814..20352
DNA (1539bp) protein (513aa)
Peptidoglycan-binding LysM n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA36_9CLOT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:CCX51124.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_318_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20367..20963
DNA (597bp) protein (199aa)
Nucleoside recognition domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6D2_9CLOT
Nucleoside recognition domain protein {ECO:0000313|EMBL:CCX51125.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
nucleoside recognition domain-containing protein
L3_105_000M1_scaffold_318_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20960..21469
DNA (510bp) protein (170aa)
Spore maturation protein B n=1 Tax=Clostridium sp. CAG:226 RepID=R5BI63_9CLOT
Spore maturation protein B {ECO:0000313|EMBL:CCX51126.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
spmB; spore maturation protein B
L3_105_000M1_scaffold_318_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21577..22290
DNA (714bp) protein (238aa)
2-phosphosulfolactate phosphatase {ECO:0000256|SAAS:SAAS00085834}; EC=3.1.3.71 {ECO:0000256|SAAS:SAAS00085834};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative 2-phosphosulfolactate phosphatase (EC:3.1.3.71)
Probable 2-phosphosulfolactate phosphatase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE50_9CLOT
L3_105_000M1_scaffold_318_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22363..23223)
DNA (861bp) protein (287aa)
ParB-like partition protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B776_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:CCX51128.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
parB-like partition protein
L3_105_000M1_scaffold_318_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23227..23991)
DNA (765bp) protein (255aa)
Chromosome segregation ATPase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA40_9CLOT
Chromosome segregation ATPase {ECO:0000313|EMBL:CCX51129.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
chromosome segregation ATPase
L3_105_000M1_scaffold_318_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23979..24560)
DNA (582bp) protein (194aa)
Acetyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6D5_9CLOT
Acetyltransferase {ECO:0000313|EMBL:CCX51130.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
acetyltransferase family protein
L3_105_000M1_scaffold_318_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24815..25495)
DNA (681bp) protein (227aa)
Putative proton-coupled thiamine transporter YuaJ n=1 Tax=Clostridium sp. CAG:226 RepID=R5BI67_9CLOT
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CCX51131.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
proton-coupled thiamine transporter YuaJ
L3_105_000M1_scaffold_318_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25915..26637)
DNA (723bp) protein (241aa)
Serine/threonine protein kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BE55_9CLOT
Serine/threonine protein kinase {ECO:0000313|EMBL:CCX51132.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
serine/threonine protein kinase
L3_105_000M1_scaffold_318_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26961..28511)
DNA (1551bp) protein (517aa)
Putative RNA methylase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B782_9CLOT
Putative RNA methylase {ECO:0000313|EMBL:CCX51133.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Putative RNA methylase family UPF0020.
L3_105_000M1_scaffold_318_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28508..29587)
DNA (1080bp) protein (360aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA45_9CLOT
L3_105_000M1_scaffold_318_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29682..31016)
DNA (1335bp) protein (445aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6E0_9CLOT
tRNA modification GTPase TrmE
L3_105_000M1_scaffold_318_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31009..32400)
DNA (1392bp) protein (464aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase (EC:2.7.7.72)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BI70_9CLOT
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:CCX51136.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_318_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32416..32694)
DNA (279bp) protein (93aa)
Toxin-antitoxin system, antitoxin component, HicB domain protein n=3 Tax=Clostridiales RepID=G9YP54_9FIRM
Toxin-antitoxin system, antitoxin component, HicB domain protein {ECO:0000313|EMBL:EHM52908.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000M1_scaffold_318_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33000..33995)
DNA (996bp) protein (332aa)
SpoIIIJ-associated protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGW7_9CLOT
SpoIIIJ-associated protein {ECO:0000313|EMBL:CCX50706.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Predicted RNA-binding protein
Displaying items 1-30 of 66 in total

View Taxonomy