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L3_105_000M1_scaffold_360

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_360_1
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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470..2569
DNA (2100bp) protein (700aa)
Uncharacterized protein n=2 Tax=Oribacterium RepID=G9WPE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10224.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
hypothetical protein
L3_105_000M1_scaffold_360_2
Bifidobacterium merycicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2541..3773
DNA (1233bp) protein (411aa)
McrBC 5-methylcytosine restriction system component n=2 Tax=Oribacterium RepID=J0LQK8_9FIRM
McrBC 5-methylcytosine restriction system component {ECO:0000313|EMBL:KFI70772.1}; TaxID=78345 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium merycicum.;"
hypothetical protein
L3_105_000M1_scaffold_360_3
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3817..4020
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R336_CLOB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC91406.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
L3_105_000M1_scaffold_360_4
unknown

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comp(4295..4423)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_105_000M1_scaffold_360_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4490..4885
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95885.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_105_000M1_scaffold_360_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4878..6614
DNA (1737bp) protein (579aa)
TnpX site-specific recombinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8C4_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:EEU95884.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_000M1_scaffold_360_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6748..7539)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50267.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_360_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7790..7963)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50268.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_360_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8046..9653)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7N6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50269.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_360_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9646..10359)
DNA (714bp) protein (238aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3W7_9CLOT
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX50270.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type multidrug transport system, ATPase component
L3_105_000M1_scaffold_360_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10512..11525)
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFP8_9CLOT
L3_105_000M1_scaffold_360_12
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11712..12644)
DNA (933bp) protein (311aa)
Uncharacterized glycosyltransferase ykcC n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQ63_9CLOT
glycosyl transferase family protein
Tax=BJP_IG2157_Clostridiales_52_13
L3_105_000M1_scaffold_360_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12751..14004
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4P4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50273.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_360_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14004..15350
DNA (1347bp) protein (449aa)
DNA repair protein radA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7P1_9CLOT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
sms; DNA repair protein RadA
L3_105_000M1_scaffold_360_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15361..16116)
DNA (756bp) protein (252aa)
Purine or other phosphorylase family 1 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3X2_9CLOT
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:CCX50275.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
purine or other phosphorylase family 1 protein
L3_105_000M1_scaffold_360_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16256..16936
DNA (681bp) protein (227aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFQ4_9CLOT
L3_105_000M1_scaffold_360_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16923..18191
DNA (1269bp) protein (423aa)
GTPase Obg n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBQ3_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
GTP1/OBG subdomain-containing protein
L3_105_000M1_scaffold_360_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18210..18497
DNA (288bp) protein (96aa)
Predicted RNA-binding protein containing KH domain n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4P7_9CLOT
Predicted RNA-binding protein containing KH domain {ECO:0000313|EMBL:CCX50278.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
yqeI; RNA-binding protein
L3_105_000M1_scaffold_360_19
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(18739..19614)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RW60_9FIRM
ATPase {ECO:0000313|EMBL:KKC48510.1}; TaxID=665792 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
hypothetical protein
L3_105_000M1_scaffold_360_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19596..20597)
DNA (1002bp) protein (334aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Glycoside hydrolase family 3 domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCH9_9CLOT
glycoside hydrolase family 3
L3_105_000M1_scaffold_360_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20594..21415)
DNA (822bp) protein (274aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|SAAS:SAAS00085795}; EC=4.2.1.126 {ECO:0000256|SAAS:SAAS00085795};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
N-acetylmuramic acid 6-phosphate etherase 2 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5J6_9CLOT
murQ; N-acetylmuramic acid 6-phosphate etherase
L3_105_000M1_scaffold_360_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21442..23211)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50539.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
beta-lactamase
L3_105_000M1_scaffold_360_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23246..24040)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4S9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50540.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
protein of unknown function DUF975
L3_105_000M1_scaffold_360_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24280..24699
DNA (420bp) protein (140aa)
VTC domain-containing protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGJ7_9CLOT
VTC domain-containing protein {ECO:0000313|EMBL:CCX50541.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
VTC domain-containing protein
L3_105_000M1_scaffold_360_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24856..26250)
DNA (1395bp) protein (465aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCI2_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCX50542.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DacC; D-alanyl-D-alanine carboxypeptidase
L3_105_000M1_scaffold_360_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26483..27166
DNA (684bp) protein (228aa)
Two component transcriptional regulator winged helix family n=2 Tax=Clostridiales RepID=R5B5K0_9CLOT
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CCX50543.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
winged helix family two component transcriptional regulator
L3_105_000M1_scaffold_360_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27156..28613
DNA (1458bp) protein (486aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4T2_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_105_000M1_scaffold_360_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28618..29655
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50546.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Lipoprotein LpqB, GerMN domain-containing protein
L3_105_000M1_scaffold_360_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29652..31238
DNA (1587bp) protein (529aa)
Lipoprotein LpqB GerMN domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCI7_9CLOT
Lipoprotein LpqB GerMN domain protein {ECO:0000313|EMBL:CCX50547.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
lipoprotein LpqB, GerMN domain-containing protein
L3_105_000M1_scaffold_360_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31249..32367
DNA (1119bp) protein (373aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5K5_9CLOT
thiouridylase
Displaying items 1-30 of 66 in total

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