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L3_105_000M1_scaffold_380

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_380_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(137..1432)
DNA (1296bp) protein (432aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGZ4_9CLOT
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:CCX50736.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cell envelope-related function transcriptional attenuator common domain
L3_105_000M1_scaffold_380_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1567..2304
DNA (738bp) protein (246aa)
Methyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD08_9CLOT
Methyltransferase {ECO:0000313|EMBL:CCX50737.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
methyltransferase
L3_105_000M1_scaffold_380_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2331..3245
DNA (915bp) protein (305aa)
33 kDa chaperonin n=1 Tax=Clostridium sp. CAG:226 RepID=R5B622_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hslO; Hsp33-like chaperonin
L3_105_000M1_scaffold_380_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3223..4950
DNA (1728bp) protein (576aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B905_9CLOT
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:CCX50739.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_380_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4947..6074
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50740.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rlmL; ribosomal RNA large subunit methyltransferase K/L
L3_105_000M1_scaffold_380_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6085..6639
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50741.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_380_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6692..7603)
DNA (912bp) protein (304aa)
Phosphate butyryltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD13_9CLOT
Phosphate butyryltransferase {ECO:0000313|EMBL:CCX50742.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Phosphate butyryltransferase
L3_105_000M1_scaffold_380_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7606..8178)
DNA (573bp) protein (191aa)
Indolepyruvate oxidoreductase subunit IorB n=1 Tax=Clostridium sp. CAG:226 RepID=R5B627_9CLOT
Indolepyruvate oxidoreductase subunit IorB {ECO:0000313|EMBL:CCX50743.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_105_000M1_scaffold_380_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8178..9959)
DNA (1782bp) protein (594aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
iorA; Indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B909_9CLOT
L3_105_000M1_scaffold_380_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10157..11317
DNA (1161bp) protein (387aa)
Proposed homoserine kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5A4_9CLOT
Proposed homoserine kinase {ECO:0000313|EMBL:CCX50745.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
homoserine kinase
L3_105_000M1_scaffold_380_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11400..11705
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BH03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50746.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_380_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11729..12046
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50747.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_380_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12178..12339
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B631_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50748.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_380_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12345..12899
DNA (555bp) protein (185aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B915_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCX50749.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_380_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12974..13951)
DNA (978bp) protein (326aa)
ROK family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5B0_9CLOT
ROK family protein {ECO:0000313|EMBL:CCX50750.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ROK family glucokinase
L3_105_000M1_scaffold_380_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13948..14877)
DNA (930bp) protein (310aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
HPr kinase/phosphorylase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BH06_9CLOT
HPr kinase
L3_105_000M1_scaffold_380_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14883..15686)
DNA (804bp) protein (268aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD23_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CCX50752.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
HAD-superfamily hydrolase, subfamily IIB
L3_105_000M1_scaffold_380_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15683..17563)
DNA (1881bp) protein (627aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:226 RepID=R5B635_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
excinuclease ABC subunit C
L3_105_000M1_scaffold_380_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17560..18138)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B917_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50754.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_380_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18527..20446
DNA (1920bp) protein (640aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Threonine--tRNA ligase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5B5_9CLOT
threonyl-tRNA synthetase
L3_105_000M1_scaffold_380_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20611..21309
DNA (699bp) protein (233aa)
Two component transcriptional regulator winged helix family n=1 Tax=Clostridium sp. CAG:226 RepID=R5BH11_9CLOT
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CCX50756.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
transcriptional regulator
L3_105_000M1_scaffold_380_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21302..22285
DNA (984bp) protein (328aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD29_9CLOT
membrane protein
L3_105_000M1_scaffold_380_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22385..23152
DNA (768bp) protein (256aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B641_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CCX50758.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter ATPase
L3_105_000M1_scaffold_380_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23145..24845
DNA (1701bp) protein (567aa)
Efflux ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B922_9CLOT
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCX50759.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
antimicrobial peptide ABC transporter permease
L3_105_000M1_scaffold_380_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25328..29284
DNA (3957bp) protein (1319aa)
Putative transcriptional regulator AraC family with Parallel beta-helix repeat n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5C2_9CLOT
Putative transcriptional regulator AraC family with Parallel beta-helix repeat {ECO:0000313|EMBL:CCX50760.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Listeria/Bacterioides repeat
L3_105_000M1_scaffold_380_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29302..29496
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BH15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50761.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_380_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29588..30271
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50762.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_380_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30268..30543
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B645_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50763.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Coenzyme PQQ synthesis protein D (PqqD)
L3_105_000M1_scaffold_380_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30604..31533)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B927_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50764.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ywbI; HTH-type transcriptional regulator YwbI
L3_105_000M1_scaffold_380_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31841..33472
DNA (1632bp) protein (544aa)
Extracellular solute-binding protein family 5 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5C7_9CLOT
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CCX50765.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
extracellular solute-binding protein
Displaying items 1-30 of 73 in total

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