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L3_105_000M1_scaffold_578

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_578_1
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(178..525)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SKE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC60435.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_105_000M1_scaffold_578_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(615..905)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50230.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Protein of unknown function (DUF3169).
L3_105_000M1_scaffold_578_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(905..1048)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50229.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_578_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1038..1256)
DNA (219bp) protein (73aa)
Predicted transcriptional regulators n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4K7_9CLOT
Predicted transcriptional regulators {ECO:0000313|EMBL:CCX50228.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Predicted transcriptional regulators
L3_105_000M1_scaffold_578_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1424..2818)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50227.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
xanthine/uracil/vitamin C permease
L3_105_000M1_scaffold_578_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2963..3532)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50226.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_578_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3513..4973)
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3S0_9CLOT
yueK; YueK
L3_105_000M1_scaffold_578_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4970..6031)
DNA (1062bp) protein (354aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7J3_9CLOT
prolipoprotein diacylglyceryl transferase
L3_105_000M1_scaffold_578_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6092..8821)
DNA (2730bp) protein (910aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4K4_9CLOT
Penicillin-binding protein 2 {ECO:0000313|EMBL:CCX50223.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_578_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8818..9351)
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBJ7_9CLOT
Rod shape-determining protein MreD {ECO:0000313|EMBL:CCX50222.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rod shape-determining protein MreD
L3_105_000M1_scaffold_578_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9356..10195)
DNA (840bp) protein (280aa)
Cell shape-determining protein MreC n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFJ7_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rod shape-determining protein MreC
L3_105_000M1_scaffold_578_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10321..11349)
DNA (1029bp) protein (343aa)
Cell shape determining protein MreB/Mrl family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3R4_9CLOT
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CCX50220.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rod shape-determining protein MreB
L3_105_000M1_scaffold_578_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11434..12201)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7I8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50219.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
N-acetyltransferase GCN5
L3_105_000M1_scaffold_578_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12246..13070)
DNA (825bp) protein (275aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4J9_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCX50218.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
binding-protein-dependent transport system inner membrane protein
L3_105_000M1_scaffold_578_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13054..13812)
DNA (759bp) protein (253aa)
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBJ1_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component {ECO:0000313|EMBL:CCX50217.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase
L3_105_000M1_scaffold_578_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13942..14127
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50216.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_578_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14131..15309)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3R0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50215.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_578_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15296..15622)
DNA (327bp) protein (109aa)
Transcriptional regulator PadR family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7I2_9CLOT
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCX50214.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative PadR family transcriptional regulator
L3_105_000M1_scaffold_578_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15713..16738)
DNA (1026bp) protein (342aa)
DNA polymerase III delta subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4J5_9CLOT
DNA polymerase III delta subunit {ECO:0000313|EMBL:CCX50213.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
holA; DNA polymerase III subunit delta
L3_105_000M1_scaffold_578_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16735..17964)
DNA (1230bp) protein (410aa)
Putative ComEC/Rec2 family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBI8_9CLOT
Putative ComEC/Rec2 family protein {ECO:0000313|EMBL:CCX50212.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative competence membrane protein precursor
L3_105_000M1_scaffold_578_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17978..18376)
DNA (399bp) protein (133aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFI9_9CLOT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CCX50211.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
endoribonuclease L-PSP
L3_105_000M1_scaffold_578_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18405..18887)
DNA (483bp) protein (161aa)
rimI; putative ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3Q2_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCX50210.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_578_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18884..19558)
DNA (675bp) protein (225aa)
Universal bacterial protein YeaZ n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7H8_9CLOT
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CCX50209.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidase M22 family protein
L3_105_000M1_scaffold_578_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19555..20010)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4J1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50208.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_578_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20012..21130)
DNA (1119bp) protein (373aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
tgt; Queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBI3_9CLOT
L3_105_000M1_scaffold_578_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21157..21471)
DNA (315bp) protein (105aa)
Addiction module toxin RelE/StbE family n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFI4_9CLOT
Addiction module toxin RelE/StbE family {ECO:0000313|EMBL:CCX50206.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
RelE/StbE family addiction module toxin
L3_105_000M1_scaffold_578_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21464..21739)
DNA (276bp) protein (92aa)
Prevent-host-death family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3Q0_9CLOT
Prevent-host-death family protein {ECO:0000313|EMBL:CCX50205.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
prevent-host-death family protein
L3_105_000M1_scaffold_578_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21801..22823)
DNA (1023bp) protein (341aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7H4_9CLOT
L3_105_000M1_scaffold_578_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23039..23917
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4I7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50203.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative xylanase/chitin deacetylase
L3_105_000M1_scaffold_578_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23923..24528
DNA (606bp) protein (202aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBH7_9CLOT
Displaying items 1-30 of 83 in total

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