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L3_105_000M1_scaffold_579

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_579_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1587)
DNA (1587bp) protein (529aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Lysine--tRNA ligase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BFN8_9CLOT
lysyl-tRNA synthetase (class II)
L3_105_000M1_scaffold_579_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1616..2089)
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3V7_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
greA; transcription elongation factor GreA
L3_105_000M1_scaffold_579_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2236..3459)
DNA (1224bp) protein (408aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7M7_9CLOT
Carboxyl-terminal protease {ECO:0000313|EMBL:CCX50259.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_579_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3629..5128
DNA (1500bp) protein (500aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glycerol kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQC1_9FIRM
glycerol kinase
L3_105_000M1_scaffold_579_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5133..6599
DNA (1467bp) protein (489aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBN3_9CLOT
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCX50257.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Predicted dehydrogenase
L3_105_000M1_scaffold_579_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6586..7854
DNA (1269bp) protein (423aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8A6_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CCX50489.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
sarcosine oxidase subunit alpha
L3_105_000M1_scaffold_579_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7856..8221
DNA (366bp) protein (122aa)
Uncharacterized protein with conserved CXXC pairs n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5B8_9CLOT
Uncharacterized protein with conserved CXXC pairs {ECO:0000313|EMBL:CCX50488.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Uncharacterized protein with conserved CXXC pairs
L3_105_000M1_scaffold_579_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8397..10532
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50487.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type oligopeptide transport system, periplasmic component
L3_105_000M1_scaffold_579_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10555..11511
DNA (957bp) protein (319aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGC6_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCX50486.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_105_000M1_scaffold_579_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11511..12476
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50485.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_105_000M1_scaffold_579_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12493..14508
DNA (2016bp) protein (672aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8A0_9CLOT
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX50484.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ABC transporter ATP-binding protein
L3_105_000M1_scaffold_579_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14579..15001
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50483.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_579_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15048..15422)
DNA (375bp) protein (125aa)
Putative superoxide reductase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHM2_9CLOT
Putative superoxide reductase {ECO:0000313|EMBL:CCX50936.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
desulfoferrodoxin ferrous iron-binding region
L3_105_000M1_scaffold_579_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16612..17046)
DNA (435bp) protein (145aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B584_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CCX50458.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_579_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17144..18997)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BC85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50457.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_579_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19109..19915)
DNA (807bp) protein (269aa)
Zinc carboxypeptidase family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4G7_9CLOT
Zinc carboxypeptidase family protein {ECO:0000313|EMBL:CCX50455.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidoglycan-binding protein
L3_105_000M1_scaffold_579_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20133..22139
DNA (2007bp) protein (669aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ftsH1; ATP-dependent zinc metalloprotease FtsH 1 (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:226 RepID=R5B867_9CLOT
L3_105_000M1_scaffold_579_18
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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22205..22993
DNA (789bp) protein (263aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R5J4_SPISS
HAD-superfamily hydrolase
Tax=BJP_08E140C01_Spirochaeta_53_29
L3_105_000M1_scaffold_579_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23054..23944
DNA (891bp) protein (297aa)
PF09924 family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA73_9CLOT
PF09924 family protein {ECO:0000313|EMBL:CCX51164.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_579_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23944..24819
DNA (876bp) protein (292aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6G2_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCX51165.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
N-acetyltransferase GCN5
L3_105_000M1_scaffold_579_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24994..25305
DNA (312bp) protein (104aa)
Protein translocase subunit yajC n=1 Tax=Clostridium sp. CAG:226 RepID=R5BI94_9CLOT
Protein translocase subunit yajC {ECO:0000313|EMBL:CCX51166.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
protein translocase subunit yajC
L3_105_000M1_scaffold_579_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25337..26332)
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3A8_9CLOT
tRNA-dihydrouridine synthase
L3_105_000M1_scaffold_579_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26334..26909)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B757_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50034.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_579_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27072..28844
DNA (1773bp) protein (591aa)
Na+/phosphate symporter n=1 Tax=Clostridium sp. CAG:226 RepID=R5B452_9CLOT
Na+/phosphate symporter {ECO:0000313|EMBL:CCX50033.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Na+/phosphate symporter
L3_105_000M1_scaffold_579_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29227..29970)
DNA (744bp) protein (248aa)
Peptidase M23 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB25_9CLOT
Peptidase M23 {ECO:0000313|EMBL:CCX50032.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidase M23
L3_105_000M1_scaffold_579_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30127..31086
DNA (960bp) protein (320aa)
Release factor glutamine methyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3A4_9CLOT
Release factor glutamine methyltransferase {ECO:0000313|EMBL:CCX50030.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_579_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31071..32255)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B753_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50029.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_579_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32422..35307
DNA (2886bp) protein (962aa)
Peptidase M16 family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B447_9CLOT
Peptidase M16 family {ECO:0000313|EMBL:CCX50028.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
insulinase family Zn-dependent peptidase
L3_105_000M1_scaffold_579_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35374..35664)
DNA (291bp) protein (97aa)
Methylated-DNA/protein-cysteinemethyltransferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B399_9CLOT
Methylated-DNA/protein-cysteinemethyltransferase {ECO:0000313|EMBL:CCX50025.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
methylated-DNA--protein-cysteine methyltransferase
L3_105_000M1_scaffold_579_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35716..37503)
DNA (1788bp) protein (596aa)
Creatinase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B749_9CLOT
Creatinase {ECO:0000313|EMBL:CCX50024.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
peptidase, M24 family
Displaying items 1-30 of 44 in total

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