ggKbase home page

L3_105_000M1_scaffold_621

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_621_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

273..662
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8M8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50584.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_621_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

699..2168
DNA (1470bp) protein (490aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4W3_9CLOT
Threonine synthase {ECO:0000313|EMBL:CCX50585.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_621_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2182..2619
DNA (438bp) protein (146aa)
UPF0735 ACT domain-containing protein HMPREF0402_01370 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGM4_9CLOT
UPF0735 ACT domain-containing protein HMPREF0402_01370 {ECO:0000313|EMBL:CCX50586.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_621_4
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2624..3763
DNA (1140bp) protein (380aa)
galactokinase (EC:2.7.1.6)
Galactokinase galactose-binding domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWZ5_9BACT
Tax=BJP_IG2157_Clostridiales_52_13
L3_105_000M1_scaffold_621_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4229..4936)
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5P0_9CLOT
deoD1; purine nucleoside phosphorylase
L3_105_000M1_scaffold_621_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4971..6224)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50589.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rmuC; DNA recombination protein RmuC homolog
L3_105_000M1_scaffold_621_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6249..7220)
DNA (972bp) protein (324aa)
Glyoxylate reductase (NADP(+)) (EC:1.1.1.79)
Glyoxylate reductase (NADP(+)) n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4W7_9CLOT
Glyoxylate reductase (NADP(+)) {ECO:0000313|EMBL:CCX50590.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_621_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7217..7981)
DNA (765bp) protein (255aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGM5_9CLOT
L3_105_000M1_scaffold_621_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7978..8382)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50592.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_621_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8379..9185)
DNA (807bp) protein (269aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5P4_9CLOT
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cobalt transport protein
L3_105_000M1_scaffold_621_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9182..10042)
DNA (861bp) protein (287aa)
Cobalt transporter ATP-binding subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8N8_9CLOT
Cobalt transporter ATP-binding subunit {ECO:0000313|EMBL:CCX50594.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cbiO; cobalt transporter ATP-binding subunit
L3_105_000M1_scaffold_621_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10018..10887)
DNA (870bp) protein (290aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Cobalt ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4X1_9CLOT
ybxA; YbxA
L3_105_000M1_scaffold_621_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11007..11924)
DNA (918bp) protein (306aa)
Hypothetical membrane protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGM9_9CLOT
Hypothetical membrane protein {ECO:0000313|EMBL:CCX50596.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Tim44-like domain.
L3_105_000M1_scaffold_621_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12091..12495
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50597.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_621_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12467..13366
DNA (900bp) protein (300aa)
Sulfatase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5P9_9CLOT
Sulfatase {ECO:0000313|EMBL:CCX50598.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_621_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13415..14182)
DNA (768bp) protein (256aa)
Uridine phosphorylase n=1 Tax=Clostridium sp. CAG:242 RepID=R6DN87_9CLOT
Uridine phosphorylase {ECO:0000313|EMBL:CDA79352.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
purine or other phosphorylase 1
L3_105_000M1_scaffold_621_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14182..15144)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8P2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50599.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
GCN5 family acetyltransferase
L3_105_000M1_scaffold_621_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15288..16634)
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4X5_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_621_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16923..18227
DNA (1305bp) protein (435aa)
Transporter major facilitator family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGN2_9CLOT
Transporter major facilitator family protein {ECO:0000313|EMBL:CCX50601.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
MFS transporter
L3_105_000M1_scaffold_621_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18229..18939
DNA (711bp) protein (237aa)
DNA repair protein RadC n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCM7_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:CCX50602.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DNA repair protein RadC
L3_105_000M1_scaffold_621_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18936..20678
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50603.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_621_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20688..22100
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50604.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
MATE efflux family protein
L3_105_000M1_scaffold_621_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22290..24374
DNA (2085bp) protein (695aa)
glnA3-2; Type-3 glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase catalytic domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4X8_9CLOT
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CCX50605.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_621_24
unknown

Not on your lists

24560..24808
DNA (249bp) protein (83aa)

This feature has no annotations

L3_105_000M1_scaffold_621_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24694..25995)
DNA (1302bp) protein (434aa)
ABC-type transport system involved in lipoprotein release permease component n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGN5_9CLOT
ABC-type transport system involved in lipoprotein release permease component {ECO:0000313|EMBL:CCX50606.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_621_26
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25992..27788)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50607.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_621_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27785..28612)
DNA (828bp) protein (276aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDF7_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX50882.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_621_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28807..29655)
DNA (849bp) protein (283aa)
ATPase involved in chromosome partitioning n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHF9_9CLOT
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:CCX50881.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_621_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29853..30911
DNA (1059bp) protein (353aa)
Peptidase M23 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5N2_9CLOT
Peptidase M23 {ECO:0000313|EMBL:CCX50880.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
metalloendopeptidase-like membrane protein
L3_105_000M1_scaffold_621_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31050..31589)
DNA (540bp) protein (180aa)
Electron transport complex RnfABCDGE type G subunit n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9C9_9CLOT
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
RnfABCDGE type electron transport complex subunit G
Displaying items 1-30 of 45 in total

View Taxonomy